RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 ICAM1P05362 532 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 NEFHP12036 1026 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 CEBPBP17676 345 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 PAX3P23760 479 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 CNTFP26441 200 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 SHC1P29353 583 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 PRCPP42785 496 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 KRTAP10-8P60410 259 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 POU5F1Q01860 360 aaKnown RBP2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 SP3Q02447 781 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 PTP4A2Q12974 167 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 CDC37Q16543 378 aaPredicted RBP2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 BAK1Q16611 211 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 HSP90B2PQ58FF3 399 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 CDC73Q6P1J9 531 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 PAQR6Q6TCH4 344 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 GET4Q7L5D6 327 aaPredicted RBP2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 SLC16A9Q7RTY1 509 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 RPAINQ86UA6 219 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 CCDC190Q86UF4 302 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 ERC1Q8IUD2 1116 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 GCSAMQ8N6F7 178 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 SLC38A9Q8NBW4 561 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 NFKBIDQ8NI38 313 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 RNF125Q96EQ8 232 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 ZNF414Q96IQ9 312 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 MAELQ96JY0 434 aaKnown RBP2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 LAT2Q9GZY6 243 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 TSPYL1Q9H0U9 437 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 TMX4Q9H1E5 349 aaPredicted RBP2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 PRR34Q9NV39 138 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 CWC15Q9P013 229 aaKnown RBP2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 SWAP70Q9UH65 585 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 KLK13Q9UKR3 277 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 B3GALT5Q9Y2C3 310 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 RPGRIP1LQ68CZ1 1315 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 SYNRGQ9UMZ2 1314 aa2.05□□□□□ -2.08
RNU4-42P-201ENST00000364738 IGHV4-61A0A0C4DH41 118 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 TEX13DA0A0J9YY54 714 aaPredicted RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 A0A1W2PRG0 241 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 BICDL2A1A5D9 508 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 H3BQ06 376 aaPredicted RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 MAP2K7O14733 419 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 ZBTB43O43298 467 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 PIP5K1CO60331 668 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 CDC123O75794 336 aaPredicted RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 LETM1O95202 739 aaPredicted RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 DUS4LO95620 317 aaKnown RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 LDHAP00338 332 aaKnown RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 F9P00740 461 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 IGHV4-59P01825 116 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 TPM2P07951 284 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 FAM200BP0CF97 657 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 DNAH10OSP0CZ25 163 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 VDRP11473 427 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 CKMT2P17540 419 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 THOP1P52888 689 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 RARSP54136 660 aaKnown RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 MRPS34P82930 218 aaKnown RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 ZBED6P86452 979 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 LMOD3Q0VAK6 560 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 FRG1Q14331 258 aaKnown RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 ZCCHC6Q5VYS8 1495 aaKnown RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 CREBRFQ8IUR6 639 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 FBXL16Q8N461 479 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 RAB42Q8N4Z0 105 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 ZNF383Q8NA42 475 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 ITFG2Q969R8 447 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 EVI5LQ96CN4 794 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 MMABQ96EY8 250 aaPredicted RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 FOXN4Q96NZ1 517 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 NR1H4Q96RI1 486 aaPredicted RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 ARPC5LQ9BPX5 153 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 PIGQQ9BRB3 760 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 TMEM39BQ9GZU3 492 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 P2RY12Q9H244 342 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 SEMA6AQ9H2E6 1030 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 SUDS3Q9H7L9 328 aaPredicted RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 RANGRFQ9HD47 186 aaPredicted RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 PCDHB16Q9NRJ7 776 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 DLGAP2Q9P1A6 1054 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 LIMA1Q9UHB6 759 aaKnown RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 FBXW11Q9UKB1 542 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 MOB4Q9Y3A3 225 aa2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 TMEM184BQ9Y519 407 aaPredicted RBP2.04□□□□□ -2.08
RNU4-42P-201ENST00000364738 UNC13AQ9UPW8 1703 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 A8MU10 97 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 HMMRO75330 724 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 SLC25A12O75746 678 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 POLBP06746 335 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 HSP90AB1P08238 724 aaKnown RBP2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 BDNFP23560 247 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 HRH2P25021 359 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 ABCD3P28288 659 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 HALP42357 657 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 HARS2P49590 506 aaKnown RBP2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 CDH11P55287 796 aa2.03□□□□□ -2.08
RNU4-42P-201ENST00000364738 TAS2R40P59535 323 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms