RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 PIWIL4Q7Z3Z4 852 aaKnown RBP4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 CEP57Q86XR8 500 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 GUF1Q8N442 669 aaKnown RBP4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 MINDY1Q8N5J2 469 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 LSMEM1Q8N8F7 131 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 ZNF622Q969S3 477 aaKnown RBP eCLIP4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 PTERQ96BW5 349 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 PRMT6Q96LA8 375 aaPredicted RBP4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 FAM81BQ96LP2 452 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 SLX1AQ9BQ83 275 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 C16orf70Q9BSU1 422 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 APOL6Q9BWW8 343 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 DENND2DQ9H6A0 471 aaPredicted RBP4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 NKIRAS2Q9NYR9 191 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 NPAP1Q9NZP6 1156 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 CPSF2Q9P2I0 782 aaKnown RBP4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 POLG2Q9UHN1 485 aa4.08□□□□□ -1.76
RNU6-560P-201ENST00000364007 LOC100509620A0A075B734 347 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 A0A0G2JNG1 304 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 hCG_1809904A0A1W2PP81 198 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 A0A1W2PPE2 198 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 A0A1W2PR64 198 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 A0A1W2PS18 150 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 IFITM10A6NMD0 228 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 HEPACAM2A8MVW5 462 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 MAGEB17A8MXT2 336 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 ANKRD66B4E2M5 251 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 H0YIN7 160 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 IKBKBO14920 756 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 TPOP07202 933 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 F7P08709 466 aaPredicted RBP4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 DNASE1P24855 282 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 ARSEP51690 589 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 GAS1P54826 345 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 CDH13P55290 713 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 DLX5P56178 289 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 NUCB1Q02818 461 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 GAGE2BQ13066 116 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 KIR2DS5Q14953 304 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 ZNF672Q499Z4 452 aaPredicted RBP4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 GAGE2EQ4V326 116 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 SIRPB2Q5JXA9 342 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 DHRS7BQ6IAN0 325 aaPredicted RBP4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 GAGE2AQ6NT46 116 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 FIGLAQ6QHK4 219 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 TMCO3Q6UWJ1 677 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 ADGRA1Q86SQ6 560 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 PTOV1Q86YD1 416 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 OR8H2Q8N162 312 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 RFLNBQ8N5W9 214 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 AVL9Q8NBF6 648 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 MCUQ8NE86 351 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 LPGAT1Q92604 370 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 OR6C1Q96RD1 312 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 OLFM1Q99784 485 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 MMP27Q9H306 513 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 GOLPH3LQ9H4A5 285 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 SLC35C2Q9NQQ7 365 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 ABCF3Q9NUQ8 709 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 MIOSQ9NXC5 875 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 RHCGQ9UBD6 479 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 CRNNQ9UBG3 495 aaPredicted RBP4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 GAGE2DQ9UEU5 116 aa4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 WBP11Q9Y2W2 641 aaKnown RBP4.07□□□□□ -1.76
RNU6-560P-201ENST00000364007 PRSS51A0A1B0GVH4 220 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 CAPN9O14815 690 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 BUD23O43709 281 aaKnown RBP4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 SSX4O60224 188 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 SYNCRIPO60506 623 aaKnown RBP4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 CTSVO60911 334 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 BAG4O95429 457 aaKnown RBP4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 AMD1P17707 334 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 IL11P20809 199 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 CBLP22681 906 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 MARK3P27448 753 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 MMP15P51511 669 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 NDUFAF5Q5TEU4 345 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 ADALQ6DHV7 355 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 TMEM211Q6ICI0 200 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 PRPF39Q86UA1 669 aaKnown RBP4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 NME8Q8N427 588 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 KCTD6Q8NC69 237 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 OR2AJ1Q8NGZ0 328 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 SMPDL3BQ92485 455 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 LRRC1Q9BTT6 524 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 FKRPQ9H9S5 495 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 PTTG2Q9NZH5 202 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 FAF1Q9UNN5 650 aaPredicted RBP4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 TTLL3Q9Y4R7 772 aa4.06□□□□□ -1.76
RNU6-560P-201ENST00000364007 ZNF541Q9H0D2 1346 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 C15orf62A8K5M9 175 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 PRSS44E7EML9 344 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 XRCC3O43542 346 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 SYNGR3O43761 229 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 PSMD10O75832 226 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 CRYAAP02489 173 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 DNTTP04053 509 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 CETPP11597 493 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 VPREB1P12018 145 aa4.05□□□□□ -1.76
RNU6-560P-201ENST00000364007 GJA1P17302 382 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms