RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 HSPA1BP0DMV9 641 aaKnown RBP7.27□□□□□ -1.24
CLCN3-202ENST00000360642 PCBP3P57721 371 aaKnown RBP7.27□□□□□ -1.24
CLCN3-202ENST00000360642 PFKPQ01813 784 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 SATB1Q01826 763 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 RFTN1Q14699 578 aaPredicted RBP7.27□□□□□ -1.24
CLCN3-202ENST00000360642 SLC39A12Q504Y0 691 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 NOMO2Q5JPE7 1267 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 KDELC2Q7Z4H8 507 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 PGAM4Q8N0Y7 254 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 DTWD1Q8N5C7 304 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 OR2C3Q8N628 320 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 PNPLA1Q8N8W4 532 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 KLHDC9Q8NEP7 349 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 GDPD5Q8WTR4 605 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 CATSPER2Q96P56 530 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 PRDM7Q9NQW5 492 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 TMEM248Q9NWD8 314 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 IL37Q9NZH6 218 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 PDP2Q9P2J9 529 aa7.27□□□□□ -1.24
CLCN3-202ENST00000360642 COPG1Q9Y678 874 aaKnown RBP7.27□□□□□ -1.24
CLCN3-202ENST00000360642 MYO16Q9Y6X6 1858 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 TCAF2A6NFQ2 919 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 TRPC5OSA6NMA1 111 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 TMEM233B4DJY2 109 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 J3KR12 359 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 SEPT4O43236 478 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 RNASEH1O60930 286 aaKnown RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 HAPLN1P10915 354 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 SRFP11831 508 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 KCNA5P22460 613 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 DPP6P42658 865 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 SERPINH1P50454 418 aaKnown RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 CCNHP51946 323 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 KPNA2P52292 529 aaKnown RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 RPL26P61254 145 aaKnown RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 DSC1Q08554 894 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 SLC10A7Q0GE19 358 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 MS4A13Q5J8X5 152 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 FAM209BQ5JX69 171 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 SH2D4BQ5SQS7 431 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 OGFRL1Q5TC84 451 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 RNF220Q5VTB9 566 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 ZNF280DQ6N043 979 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 ZNF280BQ86YH2 543 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 NUP93Q8N1F7 819 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 CALML6Q8TD86 181 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 RCN3Q96D15 328 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 HMCESQ96FZ2 354 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 JMJD8Q96S16 334 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 CDRT15Q96T59 188 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 SERPINI1Q99574 410 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 UNKQ9C0B0 810 aaKnown RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 VCX3BQ9H321 246 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 POMKQ9H5K3 350 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 ITGB1BP2Q9UKP3 347 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 PSMD13Q9UNM6 376 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 DOCK4Q8N1I0 1966 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 TTC3P53804 2025 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 FAM92AA1XBS5 289 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 NEMP2A6NFY4 417 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 TMEM189-UBE2V1I3L0A0 370 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 CNTN5O94779 1100 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 UBTFL6P0CB48 400 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 SLC2A3P11169 496 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 UQCRBP14927 111 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 CLCN5P51795 746 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 THOP1P52888 689 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 AQP4P55087 323 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 SULT2A1Q06520 285 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 GALNT1Q10472 559 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 CSHL1Q14406 222 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 KCNA10Q16322 511 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 PDCD2Q16342 344 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 GPR162Q16538 588 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 UGT8Q16880 541 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 FAM83EQ2M2I3 478 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 ALFQ53S48 1182 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 TSPYL5Q86VY4 417 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 CILP2Q8IUL8 1156 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 CCNYL1Q8N7R7 359 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 HIPK4Q8NE63 616 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 SPPL2BQ8TCT7 592 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 TUBGCP5Q96RT8 1024 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 NDNQ99608 321 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 ZYG11BQ9C0D3 744 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 YIPF3Q9GZM5 350 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 SUDS3Q9H7L9 328 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 MEAF6Q9HAF1 191 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 RGS18Q9NS28 235 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 C6orf203Q9P0P8 240 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-202ENST00000360642 TBC1D30Q9Y2I9 924 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 SQORQ9Y6N5 450 aa7.27□□□□□ -1.25
CLCN3-202ENST00000360642 LOC285095A0A1B0GVY8 99 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 A8MT66 165 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 SLC7A4O43246 635 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 IPO13O94829 963 aaKnown RBP7.26□□□□□ -1.25
CLCN3-202ENST00000360642 PENKP01210 267 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-202ENST00000360642 LTA4HP09960 611 aaKnown RBP7.26□□□□□ -1.25
CLCN3-202ENST00000360642 COL8A1P27658 744 aa7.26□□□□□ -1.25
CLCN3-202ENST00000360642 CD86P42081 329 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms