RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 WASF3Q9UPY6 502 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 ASF1AQ9Y294 204 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 FXYD6-FXYD2A0A087WZ82 144 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 TBC1D3BA6NDS4 549 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 ISM1B1AKI9 464 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 SSX4O60224 188 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 CTDNEP1O95476 244 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 KLHL26Q53HC5 615 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 METTL21CQ5VZV1 264 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF717Q9BY31 904 aaPredicted RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 FXYD6Q9H0Q3 95 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 COLEC10Q9Y6Z7 277 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 KERAO60938 352 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 ABCG1P45844 678 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 E2F1Q01094 437 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 GK5Q6ZS86 529 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 TPGS1Q6ZTW0 290 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 TSEN2Q8NCE0 465 aaKnown RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 PPM1MQ96MI6 270 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 TAAR1Q96RJ0 339 aa9.2□□□□□ -0.94
VPS13A-203ENST00000360280 THUMPD1Q9NXG2 353 aaKnown RBP9.2□□□□□ -0.94
VPS13A-203ENST00000360280 PRR5-ARHGAP8B1AHC4 643 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ANXA3P12429 323 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 GRK6P43250 576 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 CXCR3P49682 368 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ARHGAP8P85298 464 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 PON3Q15166 354 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ASTE1Q2TB18 679 aaPredicted RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 TMEM110Q86TL2 294 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 HJURPQ8NCD3 748 aaPredicted RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 RBM15BQ8NDT2 890 aaKnown RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 OR52J3Q8NH60 311 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 TBC1D16Q8TBP0 767 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 TM9SF3Q9HD45 589 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 MYOZ2Q9NPC6 264 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 TRIM64BA6NI03 449 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 PCDHGA12O60330 932 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 RENP00797 406 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 TROAPQ12815 778 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 NIPAL1Q6NVV3 410 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 SHQ1Q6PI26 577 aaKnown RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF662Q6ZS27 426 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 CPNE9Q8IYJ1 553 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 DCAKDQ8WVC6 231 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 OTUB2Q96DC9 234 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 SNTG1Q9NSN8 517 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ERBB2P04626 1255 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 GRIA1P42261 906 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 SULT2A1Q06520 285 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 GTF2IRD2BQ6EKJ0 949 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 GTF2IRD2Q86UP8 949 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 CLEC10AQ8IUN9 316 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 KIAA0895Q8NCT3 520 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 C7orf26Q96N11 449 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 BRINP2Q9C0B6 783 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 CYTH4Q9UIA0 394 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 FAM205AQ6ZU69 1335 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 BTBD19C9JJ37 291 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 IL1BP01584 269 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 TRIM28Q13263 835 aaKnown RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 NDUFA9Q16795 377 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ARSKQ6UWY0 536 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 RIOX2Q8IUF8 465 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 HTATIP2Q9BUP3 242 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF510Q9Y2H8 683 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 MAGEB17A8MXT2 336 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 PNLIPRP1P54315 467 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 TLR1Q15399 786 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 REP15Q6BDI9 236 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 TRABD2AQ86V40 505 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 SYNPOQ8N3V7 929 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 FAM86B1E9PN63 330 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 PDYNP01213 254 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 MATKP42679 507 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 UBAP2Q5T6F2 1119 aaKnown RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ALKBH2Q6NS38 261 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF565Q8N9K5 539 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 PCDHB1Q9Y5F3 818 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 CLDN4O14493 209 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 PDPK1O15530 556 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ACVR2AP27037 513 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 FGL1Q08830 312 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF155Q12901 538 aaPredicted RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 HEPACAMQ14CZ8 416 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 SCGB2B2Q4G0G5 96 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 CRTC2Q53ET0 693 aaPredicted RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 PAQR7Q86WK9 346 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ATG4CQ96DT6 458 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 FEM1AQ9BSK4 669 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 FARSBQ9NSD9 589 aaKnown RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 GDAP2Q9NXN4 497 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 SCP2D1Q9UJQ7 156 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 ILVBLA1L0T0 632 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 SLC25A14O95258 325 aaPredicted RBP9.19□□□□□ -0.94
VPS13A-203ENST00000360280 CYP1A2P05177 515 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 KHKP50053 298 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 BACE1P56817 501 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 DPY19L1Q2PZI1 675 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 SMARCD3Q6STE5 483 aa9.19□□□□□ -0.94
VPS13A-203ENST00000360280 CACUL1Q86Y37 369 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms