RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 PHPT1Q9NRX4 125 aaPredicted RBP12.71□□□□□ -0.37
SMC4-202ENST00000357388 SNTG1Q9NSN8 517 aa12.71□□□□□ -0.37
SMC4-202ENST00000357388 ABI3Q9P2A4 366 aa12.71□□□□□ -0.37
SMC4-202ENST00000357388 ZCCHC11Q5TAX3 1644 aaKnown RBP12.71□□□□□ -0.37
SMC4-202ENST00000357388 ZSCAN5BA6NJL1 495 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 ENTPD6O75354 484 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 ITGA10O75578 1167 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 SAGP10523 405 aaPredicted RBP12.71□□□□□ -0.38
SMC4-202ENST00000357388 CD36P16671 472 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 CD247P20963 164 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 ATXN1P54253 815 aaKnown RBP12.71□□□□□ -0.38
SMC4-202ENST00000357388 DLG2Q15700 870 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 RNASEH2BQ5TBB1 312 aaKnown RBP12.71□□□□□ -0.38
SMC4-202ENST00000357388 FAM91A1Q658Y4 838 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 CAPN13Q6MZZ7 669 aaPredicted RBP12.71□□□□□ -0.38
SMC4-202ENST00000357388 SCIMPQ6UWF3 145 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 OTOP1Q7RTM1 612 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 LHFPL3Q86UP9 236 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 SHC3Q92529 594 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 C8orf48Q96LL4 319 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 TBC1D14Q9P2M4 693 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 TMEM5Q9Y2B1 443 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 LIMK2P53671 638 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 MAP2K5Q13163 448 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 IQCCQ4KMZ1 466 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 WSCD1Q658N2 575 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 SLC25A25Q6KCM7 469 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 CXCL17Q6UXB2 119 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 RAB11FIP2Q7L804 512 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 KLHL36Q8N4N3 616 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 MTMR9Q96QG7 549 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 PFDN5Q99471 154 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 TOR3AQ9H497 397 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 TRPV4Q9HBA0 871 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 ERVK-5Q9HDB9 667 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 CD93Q9NPY3 652 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 TAS2R14Q9NYV8 317 aa12.71□□□□□ -0.38
SMC4-202ENST00000357388 C2P06681 752 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 LAG3P18627 525 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 SOX10P56693 466 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 RANBP3LQ86VV4 465 aaPredicted RBP12.7□□□□□ -0.38
SMC4-202ENST00000357388 TMEM161BQ8NDZ6 487 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 VANGL1Q8TAA9 524 aaPredicted RBP12.7□□□□□ -0.38
SMC4-202ENST00000357388 METTL21AQ8WXB1 218 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 C12orf43Q96C57 262 aaKnown RBP12.7□□□□□ -0.38
SMC4-202ENST00000357388 NXPE2Q96DL1 559 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 KIAA1522Q9P206 1035 aaPredicted RBP12.7□□□□□ -0.38
SMC4-202ENST00000357388 LRATO95237 230 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 SHMT1P34896 483 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 FMO1Q01740 532 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 CDK18Q07002 472 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 ZC3H12AQ5D1E8 599 aaKnown RBP12.7□□□□□ -0.38
SMC4-202ENST00000357388 TPRG1LQ5T0D9 272 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 OGFOD2Q6N063 350 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 CYP2U1Q7Z449 544 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 DENND1CQ8IV53 801 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 RBM12BQ8IXT5 1001 aaKnown RBP12.7□□□□□ -0.38
SMC4-202ENST00000357388 PPM1MQ96MI6 270 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 ITPAQ9BY32 194 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 PRDM12Q9H4Q4 367 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 KCTD5Q9NXV2 234 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 POMPQ9Y244 141 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 USP20Q9Y2K6 914 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 A0A1W2PQ67 120 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 DCLK1O15075 740 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 ERAL1O75616 437 aaKnown RBP12.7□□□□□ -0.38
SMC4-202ENST00000357388 CYP3A4P08684 503 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 LAMP2P13473 410 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 NOMO1Q15155 1222 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 COLEC12Q5KU26 742 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 RGMBQ6NW40 437 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 SLC26A9Q7LBE3 791 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 ADGRG6Q86SQ4 1221 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 FEM1AQ9BSK4 669 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 TECPR2O15040 1411 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 C5orf60A6NFR6 353 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 H0Y858 1186 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 DNM1LO00429 736 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 CXCR6O00574 342 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 BANF1O75531 89 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 OR7A10O76100 309 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 KCNA5P22460 613 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 AFF1P51825 1210 aaKnown RBP12.7□□□□□ -0.38
SMC4-202ENST00000357388 AP2S1P53680 142 aaPredicted RBP12.7□□□□□ -0.38
SMC4-202ENST00000357388 MXD1Q05195 221 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 DAG1Q14118 895 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 SLC1A5Q15758 541 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 MPPE1Q53F39 396 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 EGFL6Q8IUX8 553 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 PHYKPLQ8IUZ5 450 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 CPNE9Q8IYJ1 553 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 ZNF563Q8TA94 476 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 MAFIPQ8WZ33 124 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 TBATAQ96M53 351 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 ZSWIM3Q96MP5 696 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 AIF1LQ9BQI0 150 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 SLC39A3Q9BRY0 314 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 PLEKHA1Q9HB21 404 aa12.7□□□□□ -0.38
SMC4-202ENST00000357388 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMC4-202ENST00000357388 RNF17Q9BXT8 1623 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms