RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 SLC35E2BP0CK96 405 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 PKMP14618 531 aaKnown RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 CHRM3P20309 590 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 MSH3P20585 1137 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 MCM3P25205 808 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 AOAHP28039 575 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 NSG1P42857 185 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 RABIFP47224 123 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 TTPAP49638 278 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 THOP1P52888 689 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 YPEL5P62699 121 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 TUBB4BP68371 445 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 DEFB133Q30KQ1 61 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 WDR45BQ5MNZ6 344 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 HECTD2Q5U5R9 776 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 MRNIPQ6NTE8 343 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 MACC1Q6ZN28 852 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 ATG14Q6ZNE5 492 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 RAVER1Q8IY67 606 aaKnown RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 CENPLQ8N0S6 344 aaPredicted RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 NAGSQ8N159 534 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 WDR92Q96MX6 357 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 CYTH2Q99418 400 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 ELF4Q99607 663 aaPredicted RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 AARSD1Q9BTE6 412 aaKnown RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 GTPBP2Q9BX10 602 aaKnown RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 FAM129AQ9BZQ8 928 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 CDH19Q9H159 772 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 PCED1AQ9H1Q7 454 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 ZNF624Q9P2J8 865 aaPredicted RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 GMEB2Q9UKD1 530 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 ADAMTS6Q9UKP5 1117 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 BSNQ9UPA5 3926 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 A0A087WUV0 522 aaPredicted RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 LY6G6EA0A0G2JKS1 128 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 FAM95CA0A1B0GW59 222 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 SLC5A10A0PJK1 596 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 CACNB4O00305 520 aaPredicted RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 ARHGAP33O14559 1287 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 MAP2K7O14733 419 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 SNX2O60749 519 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 RHOBTB1O94844 696 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 EPN2O95208 641 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 HOXC4P09017 264 aaPredicted RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 NME1P15531 152 aaKnown RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 ZNF7P17097 686 aaPredicted RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 PRLHRP49683 370 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 LIMK2P53671 638 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 ADARP55265 1226 aaKnown RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 KIAA1024LP59773 190 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 ARHGAP8P85298 464 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 BOP1Q14137 746 aaKnown RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 LDLRAP1Q5SW96 308 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 PIWIL4Q7Z3Z4 852 aaKnown RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 PARGQ86W56 976 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 SLC26A11Q86WA9 606 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 CPNE9Q8IYJ1 553 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 PHACTR4Q8IZ21 702 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 SAP25Q8TEE9 199 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 GPR78Q96P69 363 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 PHPT1Q9NRX4 125 aaPredicted RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 SEMA4GQ9NTN9 838 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 TXNDC16Q9P2K2 825 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 KLQ9UEF7 1012 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 DGKBQ9Y6T7 804 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 U3KQA8 63 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 SPTBP11277 2137 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 TRIM49D1C9J1S8 452 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 CDC7O00311 574 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 TPP1O14773 563 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 FFAR2O15552 330 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 PIAS2O75928 621 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 ABHD2P08910 425 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 PAMP19021 973 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 OGNP20774 298 aaKnown RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 FDXRP22570 491 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 TEAD1P28347 426 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 GP5P40197 560 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 CD151P48509 253 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 CLDN6P56747 220 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 ZKSCAN8Q15776 578 aaPredicted RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 C18orf21Q32NC0 220 aaPredicted RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 ZDHHC20Q5W0Z9 365 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 METRNLQ641Q3 311 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 C16orf46Q6P387 395 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 CERS6Q6ZMG9 384 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 MBOAT1Q6ZNC8 495 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 ZNF438Q7Z4V0 828 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 SDCCAG8Q86SQ7 713 aaPredicted RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 ZNF548Q8NEK5 533 aaPredicted RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 GPBAR1Q8TDU6 330 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 LMX1AQ8TE12 382 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.95□□□□□ -1.78
LIG4-201ENST00000356922 RUBCNQ92622 972 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 ESAMQ96AP7 390 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 PTERQ96BW5 349 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 ELMO2Q96JJ3 720 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 INSM2Q96T92 566 aaPredicted RBP3.95□□□□□ -1.78
LIG4-201ENST00000356922 TCF12Q99081 682 aa3.95□□□□□ -1.78
LIG4-201ENST00000356922 GPR22Q99680 433 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms