RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PAPSS2O95340 614 aaPredicted RBP10.01□□□□□ -0.81
PTPRA-203ENST00000356147 FADS2O95864 444 aaKnown RBP10.01□□□□□ -0.81
PTPRA-203ENST00000356147 C1QCP02747 245 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 ITGB1P05556 798 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 CAPN1P07384 714 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 HTR1EP28566 365 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 EEFSECP57772 596 aaKnown RBP10.01□□□□□ -0.81
PTPRA-203ENST00000356147 ERVPABLB-1P60509 514 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 PRKG2Q13237 762 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 RAPSNQ13702 412 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 SF3B4Q15427 424 aaKnown RBP eCLIP10.01□□□□□ -0.812e-7■■■■■ 28.8
PTPRA-203ENST00000356147 PTPRNQ16849 979 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 ARTNQ5T4W7 220 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 IRAK1BP1Q5VVH5 260 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 LAIR1Q6GTX8 287 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 TIGD7Q6NT04 549 aaPredicted RBP10.01□□□□□ -0.81
PTPRA-203ENST00000356147 LETMD1Q6P1Q0 360 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 SCD5Q86SK9 330 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 ADCK1Q86TW2 530 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 STAG3L4Q8TBR4 150 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 MCOLN3Q8TDD5 553 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 FUBP1Q96AE4 644 aaKnown RBP10.01□□□□□ -0.81
PTPRA-203ENST00000356147 CGREF1Q99674 301 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 MROQ9BYG7 248 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 ACTL8Q9H568 366 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 HMG20AQ9NP66 347 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 ENPP5Q9UJA9 477 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 VPS4AQ9UN37 437 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 PMF1-BGLAPU3KQ54 211 aa10.01□□□□□ -0.81
PTPRA-203ENST00000356147 MROH6A6NGR9 719 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 GUCA1CO95843 209 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 ENO2P09104 434 aaPredicted RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 RAP2AP10114 183 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 PABPC1P11940 636 aaKnown RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 JUNBP17275 347 aaPredicted RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 LHX1P48742 406 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 RENBPP51606 427 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 NFKB2Q00653 900 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 MAPRE1Q15691 268 aaKnown RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 ZNF792Q3KQV3 632 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 GCNT7Q6ZNI0 430 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 DET1Q7L5Y6 550 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 CFAP52Q8N1V2 620 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 SCML4Q8N228 414 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 OR4L1Q8NH43 312 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 METTL6Q8TCB7 284 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 EEF1AKMT1Q8WVE0 214 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 FAM162AQ96A26 154 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 MYEOVQ96EZ4 313 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 ZNF599Q96NL3 588 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 AARSD1Q9BTE6 412 aaKnown RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 TDRD1Q9BXT4 1180 aaKnown RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 ACTR8Q9H981 624 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 RASSF1Q9NS23 344 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 LOC100130705A0A1B0GUX0 176 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 RBM47A0AV96 593 aaKnown RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 GOLGA8CPA6NN73 597 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 UGT2B11O75310 529 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 MLYCDO95822 493 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 CHEK2O96017 543 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 THP07101 528 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 C7P10643 843 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 UMPSP11172 480 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 TCEA1P23193 301 aaKnown RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 NR4A2P43354 598 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 RPS3AP61247 264 aaKnown RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 TRIP4Q15650 581 aaPredicted RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 RAP1GAP2Q684P5 730 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 MRNIPQ6NTE8 343 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 PAGE2Q7Z2X7 111 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 ANKRD46Q86W74 232 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 CLIP4Q8N3C7 705 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 OR2T12Q8NG77 320 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 OR4K2Q8NGD2 314 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 PNPT1Q8TCS8 783 aaKnown RBP10□□□□□ -0.81
PTPRA-203ENST00000356147 IGSF8Q969P0 613 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 SLC47A1Q96FL8 570 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 ZNF583Q96ND8 569 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 ZBED2Q9BTP6 218 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 MAF1Q9H063 256 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 KATNBL1Q9H079 304 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 RIBC2Q9H4K1 309 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 AKIP1Q9NQ31 210 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 SLC6A13Q9NSD5 602 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 WDR70Q9NW82 654 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 SPO11Q9Y5K1 396 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 LOC285556D6RIA3 1793 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 C16orf96A6NNT2 1141 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 PSMD11O00231 422 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 EPHA2P29317 976 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 ERVK-8P63133 956 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 HMGCS1Q01581 520 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 FOXM1Q08050 763 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 EFEMP1Q12805 493 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 GTF2H3Q13889 308 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 DDR2Q16832 855 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 XKR4Q5GH76 650 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 MANEALQ5VSG8 457 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 GPRIN3Q6ZVF9 776 aa10□□□□□ -0.81
PTPRA-203ENST00000356147 SLC22A15Q8IZD6 547 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms