RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 LVRNQ6Q4G3 990 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 MTERF4Q7Z6M4 381 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 LMNTD2Q8IXW0 634 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 SDR16C5Q8N3Y7 309 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 ATXN7L3BQ96GX2 97 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 CNDP2Q96KP4 475 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 LINC00615Q96LM1 132 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 DUSP23Q9BVJ7 150 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 TSPYL1Q9H0U9 437 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 SCHIP1Q9P0W5 487 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 GNPTGQ9UJJ9 305 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 WDR37Q9Y2I8 494 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 DNMT3AQ9Y6K1 912 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 LY6G6EA0A0G2JKS1 128 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 GIPC1O14908 333 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 NOBOXO60393 691 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 NIPSNAP2O75323 286 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 BRAFP15056 766 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 PREPP48147 710 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 LEPRP48357 1165 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 MAZP56270 477 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 BOP1Q14137 746 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 ZNF658BQ4V348 819 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 CCNI2Q6ZMN8 369 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 RELL1Q8IUW5 271 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 NAGSQ8N159 534 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 UHMK1Q8TAS1 419 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 ELMO1Q92556 727 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 NDNQ99608 321 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 SARS2Q9NP81 518 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 GALPQ9UBC7 116 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 FTSJ1Q9UET6 329 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 U3KQA8 63 aa17.55■□□□□ 0.4
PDLIM7-202ENST00000355841 DCDC2BA2VCK2 349 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 A6NCN8 305 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 LDOC1O95751 146 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 C1QAP02745 245 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 FTH1P02794 183 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 IDSP22304 550 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 RPS3P23396 243 aaKnown RBP eCLIP17.54■□□□□ 0.49e-7■□□□□ 8.9
PDLIM7-202ENST00000355841 PDHA2P29803 388 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 HOXD11P31277 338 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 CCR7P32248 378 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 TUBB4BP68371 445 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 PROX2Q3B8N5 592 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 KBTBD12Q3ZCT8 623 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 METRNLQ641Q3 311 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 CEP128Q6ZU80 1094 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 STRA8Q7Z7C7 330 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 LRRC6Q86X45 466 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 SPDYE1Q8NFV5 336 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 BAHD1Q8TBE0 780 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 HM13Q8TCT9 377 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 VPS9D1Q9Y2B5 631 aa17.54■□□□□ 0.4
PDLIM7-202ENST00000355841 OR52A4PA6NMU1 304 aa17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 ESR1P03372 595 aa17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 GSTA2P09210 222 aa17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 PKMP14618 531 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 KCNA4P22459 653 aa17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 TNFRSF8P28908 595 aa17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 CLCNKAP51800 687 aa17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 ADARP55265 1226 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 DMPKQ09013 629 aa17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 CLCA4Q14CN2 919 aa17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 CCDC157Q569K6 752 aa17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 CTAGE3PQ8IX95 158 aa17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 ARL10Q8N8L6 244 aa17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 GABPB2Q8TAK5 448 aaPredicted RBP17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 MRRFQ96E11 262 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 COG4Q9H9E3 785 aa17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 PCDHB1Q9Y5F3 818 aa17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 CFAP20Q9Y6A4 193 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 ARHGEF17Q96PE2 2063 aaPredicted RBP17.53■□□□□ 0.4
PDLIM7-202ENST00000355841 PRAMEF33A0A0G2JMD5 474 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 C17orf113A0A1B0GUU1 675 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 SPAARA0A1B0GVQ0 90 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 CPED1A4D0V7 1026 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 FAM159BA6NKW6 160 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 QSOX1O00391 747 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 F3P13726 295 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 CHRM3P20309 590 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 STX2P32856 288 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 PGGT1BP53609 377 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 DAB2P98082 770 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 SLMAPQ14BN4 828 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 TRIP6Q15654 476 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 RBM20Q5T481 1227 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 GUSBP11Q6P575 273 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 IYDQ6PHW0 289 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 OGFOD3Q6PK18 319 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 KIAA0408Q6ZU52 694 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 PPM1NQ8N819 430 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 FAM181AQ8N9Y4 354 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 GPR156Q8NFN8 814 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 SLC37A2Q8TED4 501 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 PARD6BQ9BYG5 372 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 WWP1Q9H0M0 922 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 TSR3Q9UJK0 312 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 MED16Q9Y2X0 877 aa17.52■□□□□ 0.4
PDLIM7-202ENST00000355841 PIKFYVEQ9Y2I7 2098 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms