RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 HERVK_113P63132 956 aa7.95□□□□□ -1.14
HTT-201ENST00000355072 FATE1Q969F0 183 aa7.95□□□□□ -1.14
HTT-201ENST00000355072 ERVK-6Q9BXR3 956 aa7.95□□□□□ -1.14
HTT-201ENST00000355072 GPN2Q9H9Y4 310 aaPredicted RBP7.95□□□□□ -1.14
HTT-201ENST00000355072 THG1LQ9NWX6 298 aaKnown RBP7.95□□□□□ -1.14
HTT-201ENST00000355072 FBXL21Q9UKT6 434 aa7.95□□□□□ -1.14
HTT-201ENST00000355072 SMLR1H3BR10 107 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 TKTL1P51854 596 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 FBXO31Q5XUX0 539 aaPredicted RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 ZNF606Q8WXB4 792 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 WASF2Q9Y6W5 498 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 TYRP14679 529 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 FSHRP23945 695 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 RHOAP61586 193 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 FSTL1Q12841 308 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 PFKFB4Q16877 469 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 SMU1Q2TAY7 513 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 GARNL3Q5VVW2 1013 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 VSTM1Q6UX27 236 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 LDHDQ86WU2 507 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 MED8Q96G25 268 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 PARK7Q99497 189 aaKnown RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 RNF146Q9NTX7 359 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 LYARQ9NX58 379 aaKnown RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 HEBP2Q9Y5Z4 205 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 DISC1C4P0D8 188 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 TCF7P36402 384 aaPredicted RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 SPOCK1Q08629 439 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 FAM153CQ494X1 144 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 C4orf46Q504U0 113 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 SH3PXD2AQ5TCZ1 1133 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 KCTD8Q6ZWB6 473 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 ANKRD13BQ86YJ7 626 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 KLHL36Q8N4N3 616 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 TSNAXQ99598 290 aaKnown RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 POMPQ9Y244 141 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 MAU2Q9Y6X3 613 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 NUP98P52948 1817 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 SULT1C2O00338 296 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 UBXN7O94888 489 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 THP07101 528 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 CBWD3Q5JTY5 395 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 CBWD5Q5RIA9 395 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 DCLRE1AQ6PJP8 1040 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 CREB3L2Q70SY1 520 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 SPATA22Q8NHS9 363 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 COL21A1Q96P44 957 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 SLC39A3Q9BRY0 314 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 LRRC4CQ9HCJ2 640 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 CHKBQ9Y259 395 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 PIK3C2AO00443 1686 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 ARHGAP12Q8IWW6 846 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 RGPD5Q99666 1765 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 GXYLT2A0PJZ3 443 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 DNM1LO00429 736 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 XRCC1P18887 633 aaPredicted RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 RYKP34925 604 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 MECP2P51608 486 aaKnown RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 TAS2R41P59536 307 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 PIGXQ8TBF5 258 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 ZNF717Q9BY31 904 aaPredicted RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 GLOD4Q9HC38 313 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 XPNPEP3Q9NQH7 507 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 CISHQ9NSE2 258 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 ETNK2Q9NVF9 386 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 AQP4P55087 323 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 SLC9A5Q14940 896 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 PAOXQ6QHF9 649 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 TTLL6Q8N841 843 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 TRNT1Q96Q11 434 aaKnown RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 BCL2L14Q9BZR8 327 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 FAM230AA0A1W2PPH8 454 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 CYP27B1O15528 508 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 EEFSECP57772 596 aaKnown RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 GALK2Q01415 458 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 GNASQ5JWF2 1037 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 CYP2W1Q8TAV3 490 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 ZDHHC4Q9NPG8 344 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 ZNF69Q9UC07 566 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 VPS28Q9UK41 221 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 GADD45AP24522 165 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 RGS6P49758 472 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 ATP4BP51164 291 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 IFI35P80217 286 aaPredicted RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 DDX39BQ13838 428 aaKnown RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 GIT2Q14161 759 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 SNAPC1Q16533 368 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 TPRG1LQ5T0D9 272 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 DPY19L3Q6ZPD9 716 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 MAPK15Q8TD08 544 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 ZSWIM3Q96MP5 696 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 OR5B12Q96R08 314 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 GBA3Q9H227 469 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 ATG4BQ9Y4P1 393 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 WDR27A2RRH5 827 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 CCRL2O00421 344 aa7.94□□□□□ -1.14
HTT-201ENST00000355072 RPS17P08708 135 aaKnown RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 CACNB1Q02641 598 aaPredicted RBP7.94□□□□□ -1.14
HTT-201ENST00000355072 CBFBQ13951 182 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms