RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 UNC5AQ6ZN44 842 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 GALNT5Q7Z7M9 940 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 GPALPP1Q8IXQ4 340 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 OR6Q1Q8NGQ2 317 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 TREM1Q9NP99 234 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 NDFIP2Q9NV92 336 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SMOXQ9NWM0 555 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 GGA3Q9NZ52 723 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 TSR3Q9UJK0 312 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 ST3GAL5Q9UNP4 418 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 BCS1LQ9Y276 419 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 TNPO3Q9Y5L0 923 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 PTPRJQ12913 1337 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 DPYSL4O14531 572 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 PPEF2O14830 753 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 OIP5O43482 229 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CDK1P06493 297 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CHI3L1P36222 383 aaPredicted RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 RGS6P49758 472 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CAPZA1P52907 286 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SREBF2Q12772 1141 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 BMT2Q1RMZ1 405 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 Q3C1V9 767 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 ZNF782Q6ZMW2 699 aaPredicted RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 GCNT7Q6ZNI0 430 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 ZC3HC1Q86WB0 502 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 PHF13Q86YI8 300 aaPredicted RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 DNAJB8Q8NHS0 232 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 UPF1Q92900 1129 aaKnown RBP eCLIP4.98□□□□□ -1.611e-12■□□□□ 10.7
SKP1-202ENST00000353411 NUSAP1Q9BXS6 441 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 NXF3Q9H4D5 531 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 SLC38A7Q9NVC3 462 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 HCN2Q9UL51 889 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 FARP1Q9Y4F1 1045 aaPredicted RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 ZNF804BA4D1E1 1349 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SPEF2Q9C093 1822 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 OR2AT4A6NND4 320 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 ARPC2O15144 300 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 ADAM12O43184 909 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 HCN1O60741 890 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SNX4O95219 450 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 FABP3P05413 133 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 GSTM1P09488 218 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 IL1R1P14778 569 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CTRB1P17538 263 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 POLR2JP52435 117 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 SLC16A1P53985 500 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 PPP3R1P63098 170 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 TSTA3Q13630 321 aaPredicted RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 FGFBP1Q14512 234 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CBWD6Q4V339 395 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 KLHL26Q53HC5 615 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 NOMO2Q5JPE7 1267 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CBWD3Q5JTY5 395 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CBWD5Q5RIA9 395 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 C1orf189Q5VU69 101 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CTRB2Q6GPI1 263 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 DNAJB7Q7Z6W7 309 aaPredicted RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 RIT1Q92963 219 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 DCPSQ96C86 337 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 SERPINB11Q96P15 392 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SLC9A7Q96T83 725 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 RIT2Q99578 217 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 NEURL2Q9BR09 285 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 ARHGAP28Q9P2N2 729 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 MGAT4AQ9UM21 535 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CSADQ9Y600 493 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CACNA1CQ13936 2221 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CAPN14A8MX76 684 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 AZIN1O14977 448 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 UBA1P22314 1058 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 GRAPQ13588 217 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 Q3ZCU0 254 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 MSANTD1Q6ZTZ1 278 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 PEG10Q86TG7 708 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 ACDQ96AP0 544 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 GPRASP2Q96D09 838 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 MUS81Q96NY9 551 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 PI4K2AQ9BTU6 479 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 IFT27Q9BW83 186 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 C8orf33Q9H7E9 229 aaPredicted RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 MTMR4Q9NYA4 1195 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 KLHL21Q9UJP4 597 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 MGAT4BQ9UQ53 548 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 CA5BQ9Y2D0 317 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 UGT2A1Q9Y4X1 527 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 HRH3Q9Y5N1 445 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 C10orf71Q711Q0 1435 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 OTOFQ9HC10 1997 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 TCRBV7S2A1N4TA0A589 114 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 ASB14A6NK59 587 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 IFNA17P01571 189 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 RLN1P04808 185 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 DNAJB1P25685 340 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 AFF1P51825 1210 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 ERVFC1P60507 584 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 RPP38P78345 283 aaKnown RBP4.98□□□□□ -1.61
SKP1-202ENST00000353411 FMO1Q01740 532 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 KRT33BQ14525 404 aa4.98□□□□□ -1.61
SKP1-202ENST00000353411 SHROOM1Q2M3G4 852 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms