RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 NR5A2O00482 541 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 SEC24DO94855 1032 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-204ENST00000353317 CHRM3P20309 590 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 CAPN3P20807 821 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 OXTRP30559 389 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 CDKN2DP55273 166 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 MERTKQ12866 999 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 TRAF2Q12933 501 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 KIF19Q2TAC6 998 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 PLEKHG6Q3KR16 790 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 KCTD21Q4G0X4 260 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 INTS11Q5TA45 600 aaKnown RBP8.5□□□□□ -1.05
TRIM55-204ENST00000353317 TTC33Q6PID6 262 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-204ENST00000353317 GPR141Q7Z602 305 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 GPR180Q86V85 440 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 PIM3Q86V86 326 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 CAMK1DQ8IU85 385 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 SLC22A9Q8IVM8 553 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 SLC15A3Q8IY34 581 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 CPNE9Q8IYJ1 553 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 BBS5Q8N3I7 341 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 PCYOX1LQ8NBM8 494 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 OR13J1Q8NGT2 312 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ADAMTS16Q8TE57 1224 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 IRF7Q92985 503 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 C12orf43Q96C57 262 aaKnown RBP8.5□□□□□ -1.05
TRIM55-204ENST00000353317 DCUN1D5Q9BTE7 237 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ADI1Q9BV57 179 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 CINPQ9BW66 212 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-204ENST00000353317 TRIM8Q9BZR9 551 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 TNKS2Q9H2K2 1166 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 SPHK2Q9NRA0 654 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 VPS45Q9NRW7 570 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 AGPAT4Q9NRZ5 378 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 SEPT3Q9UH03 358 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 SLCO3A1Q9UIG8 710 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 VWA7Q9Y334 891 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ARL5AQ9Y689 179 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 COL4A3Q01955 1670 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 F5P12259 2224 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 MYO10Q9HD67 2058 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 A0A087WXM4 84 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 FXYD1O00168 92 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 LDB2O43679 373 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 FOXD2O60548 495 aaPredicted RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 STAMBPO95630 424 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 TYRP14679 529 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 PFKLP17858 780 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 MYF6P23409 242 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 DDX6P26196 483 aaKnown RBP eCLIP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 WEE1P30291 646 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 ATP4BP51164 291 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 CLCN5P51795 746 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 FOXA1P55317 472 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 STX1BP61266 288 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 ATP6V0D1P61421 351 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 CAPRIN1Q14444 709 aaKnown RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 GAB4Q2WGN9 574 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 ZBED5Q49AG3 693 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 UNC50Q53HI1 259 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 ARHGAP15Q53QZ3 475 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 MPP7Q5T2T1 576 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 ADIPOR2Q86V24 386 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 CILP2Q8IUL8 1156 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 MDGA1Q8NFP4 955 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 TRPC4APQ8TEL6 797 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 GFM2Q969S9 779 aaKnown RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 ZUFSPQ96AP4 578 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 PTERQ96BW5 349 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 TIFAQ96CG3 184 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 MRPL38Q96DV4 380 aaKnown RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 L3HYPDHQ96EM0 354 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 TRMOQ9BU70 441 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 BBS2Q9BXC9 721 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 TUBA8Q9NY65 449 aaPredicted RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 HACD3Q9P035 362 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 CLEC1BQ9P126 229 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 OAZ3Q9UMX2 235 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 FAF1Q9UNN5 650 aaPredicted RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 DNAH14Q0VDD8 3507 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 TRIM64A6NGJ6 449 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 AQP12BA6NM10 295 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 ZSCAN9O15535 394 aaPredicted RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 WISP3O95389 354 aaPredicted RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 PRSS56P0CW18 603 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 SLC6A2P23975 617 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 FCARP24071 287 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 SERPINH1P50454 418 aaKnown RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 CCT8P50990 548 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 NUP107P57740 925 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 ESRRGP62508 458 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 GRB7Q14451 532 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 GEN1Q17RS7 908 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 SLC36A3Q495N2 470 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 AQP12AQ8IXF9 295 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 CLYBLQ8N0X4 340 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 PACRGLQ8N7B6 248 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 DCAF4L2Q8NA75 395 aa8.49□□□□□ -1.05
TRIM55-204ENST00000353317 SNRNP27Q8WVK2 155 aaKnown RBP8.49□□□□□ -1.05
TRIM55-204ENST00000353317 EID2BQ96D98 161 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms