RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 VCLP18206 1134 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 NFKBIAP25963 317 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 NNMTP40261 264 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 SPINT3P49223 89 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 ERVK-8P63133 956 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 NTHL1P78549 312 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 SEMG2Q02383 582 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 TMEM126BQ8IUX1 230 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 PLCD3Q8N3E9 789 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 CDYL2Q8N8U2 506 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 BHLHE22Q8NFJ8 381 aaPredicted RBP16.44■□□□□ 0.22
SAMM50-201ENST00000350028 GID8Q9NWU2 228 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 ZDHHC7Q9NXF8 308 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 CD300AQ9UGN4 299 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 DPP7Q9UHL4 492 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 TSR3Q9UJK0 312 aaKnown RBP16.44■□□□□ 0.22
SAMM50-201ENST00000350028 ST14Q9Y5Y6 855 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 NOTCH4Q99466 2003 aa16.44■□□□□ 0.22
SAMM50-201ENST00000350028 LINC01553A4QN01 128 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 CCDC85CA6NKD9 419 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 VGLL3A8MV65 326 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 C5orf67F2Z3F1 127 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 ANGPT2O15123 496 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 TAPBPO15533 448 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 RB1P06400 928 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 OR56A5P0C7T3 313 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 MSX2P35548 267 aaPredicted RBP16.43■□□□□ 0.22
SAMM50-201ENST00000350028 VASPP50552 380 aaPredicted RBP16.43■□□□□ 0.22
SAMM50-201ENST00000350028 KLC1Q07866 573 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 ARHGEF7Q14155 803 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 ATP13A5Q4VNC0 1218 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 PDCD4Q53EL6 469 aaKnown RBP16.43■□□□□ 0.22
SAMM50-201ENST00000350028 CDKL4Q5MAI5 379 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 BLOC1S3Q6QNY0 202 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 OR52B6Q8NGF0 335 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 METTL6Q8TCB7 284 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 UBTD2Q8WUN7 234 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 ATP6V1E2Q96A05 226 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 ACOX2Q99424 681 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 EGFL8Q99944 293 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 MAP10Q9P2G4 905 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 SLC8A2Q9UPR5 921 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 WNT6Q9Y6F9 365 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 PLXNB3Q9ULL4 1909 aa16.43■□□□□ 0.22
SAMM50-201ENST00000350028 LAMA3Q16787 3333 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 OR7A17O14581 309 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 SYN1P17600 705 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 VIPR1P32241 457 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 IRS1P35568 1242 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 NME5P56597 212 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 MRPS22P82650 360 aaKnown RBP16.42■□□□□ 0.22
SAMM50-201ENST00000350028 MRPS35P82673 323 aaKnown RBP16.42■□□□□ 0.22
SAMM50-201ENST00000350028 TRIP10Q15642 601 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 C18orf21Q32NC0 220 aaPredicted RBP16.42■□□□□ 0.22
SAMM50-201ENST00000350028 LETMD1Q6P1Q0 360 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 TTC23LQ6PF05 361 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 LAYNQ6UX15 382 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 GRASPQ7Z6J2 395 aaPredicted RBP16.42■□□□□ 0.22
SAMM50-201ENST00000350028 MILR1Q7Z6M3 343 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 RETREG3Q86VR2 466 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 PDSS2Q86YH6 399 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 MINDY1Q8N5J2 469 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 KIAA1958Q8N8K9 716 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 FRS2Q8WU20 508 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 NAT14Q8WUY8 206 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 ZSWIM3Q96MP5 696 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 GPATCH1Q9BRR8 931 aaKnown RBP16.42■□□□□ 0.22
SAMM50-201ENST00000350028 CD244Q9BZW8 370 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 BRINP2Q9C0B6 783 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 NSUN3Q9H649 340 aaKnown RBP16.42■□□□□ 0.22
SAMM50-201ENST00000350028 IPPKQ9H8X2 491 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 RAD18Q9NS91 495 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 ELOVL2Q9NXB9 296 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 FBXO10Q9UK96 956 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 TSPAN11A1L157 253 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 GUCA1CO95843 209 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 CAPN1P07384 714 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 TCN1P20061 433 aaPredicted RBP16.42■□□□□ 0.22
SAMM50-201ENST00000350028 CAPN3P20807 821 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 ARL1P40616 181 aaPredicted RBP16.42■□□□□ 0.22
SAMM50-201ENST00000350028 HSPA7P48741 367 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 DIO3P55073 304 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 FOXM1Q08050 763 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 MAP7D1Q3KQU3 841 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 ATP6AP1LQ52LC2 224 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 C6orf136Q5SQH8 315 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 OGFRL1Q5TC84 451 aaPredicted RBP16.42■□□□□ 0.22
SAMM50-201ENST00000350028 LPCAT4Q643R3 524 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 TMEM215Q68D42 235 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 SCIMPQ6UWF3 145 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 RFLNAQ6ZTI6 216 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 OR4F6Q8NGB9 312 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 OR2T11Q8NH01 316 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 PPP2R3CQ969Q6 453 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 RHBDF1Q96CC6 855 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 MRGPRX3Q96LB0 322 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 APOL5Q9BWW9 433 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 WWOXQ9NZC7 414 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 ZIM2Q9NZV7 527 aa16.42■□□□□ 0.22
SAMM50-201ENST00000350028 OPTCQ9UBM4 332 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms