RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 HID1Q8IV36 788 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 SMG7Q92540 1137 aaKnown RBP14.57□□□□□ -0.08
NUP50-201ENST00000347635 FBXL20Q96IG2 436 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 MAGEB10Q96LZ2 347 aaPredicted RBP14.57□□□□□ -0.08
NUP50-201ENST00000347635 GAS2L1Q99501 681 aaPredicted RBP14.57□□□□□ -0.08
NUP50-201ENST00000347635 NDEL1Q9GZM8 345 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 TMEM245Q9H330 911 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 PDP1Q9P0J1 537 aaPredicted RBP14.57□□□□□ -0.08
NUP50-201ENST00000347635 EMCNQ9ULC0 261 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 PIRO00625 290 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 MYL12BO14950 172 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 FTH1P02794 183 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 TAZQ16635 292 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 TIGD5Q53EQ6 642 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 ZNF678Q5SXM1 525 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 TMEM209Q96SK2 561 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 ZC4H2Q9NQZ6 224 aa14.57□□□□□ -0.08
NUP50-201ENST00000347635 H3BN98 237 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 H3BNH8 94 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 CXCR6O00574 342 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 ALDH6A1Q02252 535 aaKnown RBP14.56□□□□□ -0.08
NUP50-201ENST00000347635 CYP4F3Q08477 520 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 EIF2B5Q13144 721 aaKnown RBP14.56□□□□□ -0.08
NUP50-201ENST00000347635 CHSY3Q70JA7 882 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 MAPRE3Q9UPY8 281 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 ARIH1Q9Y4X5 557 aaPredicted RBP14.56□□□□□ -0.08
NUP50-201ENST00000347635 RAI2Q9Y5P3 530 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 NRAPQ86VF7 1730 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 KPNA3O00505 521 aaPredicted RBP14.56□□□□□ -0.08
NUP50-201ENST00000347635 KERAO60938 352 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 MAPKAPK2P49137 400 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 ECT2LQ008S8 904 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 TP53BP2Q13625 1128 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 TRIP4Q15650 581 aaPredicted RBP14.56□□□□□ -0.08
NUP50-201ENST00000347635 SIRPB2Q5JXA9 342 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 C11orf96Q7Z7L8 435 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 CIR1Q86X95 450 aaPredicted RBP14.56□□□□□ -0.08
NUP50-201ENST00000347635 CPA6Q8N4T0 437 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 PROX1Q92786 737 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 TAMM41Q96BW9 452 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 HBEGFQ99075 208 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 ABCG8Q9H221 673 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 PCDH12Q9NPG4 1184 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 FBXL21Q9UKT6 434 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 PCDHB9Q9Y5E1 797 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 NFATC1O95644 943 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 TACR2P21452 398 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 ANXA11P50995 505 aaKnown RBP14.56□□□□□ -0.08
NUP50-201ENST00000347635 PITX1P78337 314 aaPredicted RBP14.56□□□□□ -0.08
NUP50-201ENST00000347635 MAPK15Q8TD08 544 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 SLC13A3Q8WWT9 602 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 ESAMQ96AP7 390 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 PRICKLE1Q96MT3 831 aaPredicted RBP14.56□□□□□ -0.08
NUP50-201ENST00000347635 SLC2A13Q96QE2 648 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 ZNF99A8MXY4 864 aaPredicted RBP14.56□□□□□ -0.08
NUP50-201ENST00000347635 GRM6O15303 877 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 GPC1P35052 558 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 CACNG1Q06432 222 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 PHKG1Q16816 387 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 UGT2A3Q6UWM9 527 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 CILP2Q8IUL8 1156 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 TM6SF2Q9BZW4 377 aa14.56□□□□□ -0.08
NUP50-201ENST00000347635 MYH14Q7Z406 1995 aaKnown RBP14.55□□□□□ -0.08
NUP50-201ENST00000347635 KPNA5O15131 536 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 FABP3P05413 133 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 IL4RP24394 825 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 IL12AP29459 219 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 CYP4F2P78329 520 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 DMPKQ09013 629 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 CEP97Q8IW35 865 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 LIX1Q8N485 282 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 OR13C4Q8NGS5 318 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 SCLYQ96I15 445 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 OLFM1Q99784 485 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 ELAC1Q9H777 363 aaKnown RBP14.55□□□□□ -0.08
NUP50-201ENST00000347635 FBRSL1Q9HCM7 1045 aaKnown RBP14.55□□□□□ -0.08
NUP50-201ENST00000347635 RASSF1Q9NS23 344 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 GIN1Q9NXP7 522 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 SUV39H1O43463 412 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 ECI2O75521 394 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 BMP10O95393 424 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 ITGA2P17301 1181 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 ACOX1Q15067 660 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 RAB30Q15771 203 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 DET1Q7L5Y6 550 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 TMBIM1Q969X1 311 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 TSSK3Q96PN8 268 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 SMOQ99835 787 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 CLN6Q9NWW5 311 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 STMN3Q9NZ72 180 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.55□□□□□ -0.08
NUP50-201ENST00000347635 ZW10O43264 779 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 HSPA7P48741 367 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 TAF1AQ15573 450 aaPredicted RBP14.55□□□□□ -0.08
NUP50-201ENST00000347635 PAQR3Q6TCH7 311 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 CPNE9Q8IYJ1 553 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 ZNF420Q8TAQ5 688 aaPredicted RBP14.55□□□□□ -0.08
NUP50-201ENST00000347635 MS4A4AQ96JQ5 239 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 ZIM2Q9NZV7 527 aa14.55□□□□□ -0.08
NUP50-201ENST00000347635 CFAP97Q9P2B7 532 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms