RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 SBK3P0C264 359 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 LAMB3Q13751 1172 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 SWT1Q5T5J6 900 aaKnown RBP13.12□□□□□ -0.31
CASC4-202ENST00000345795 CACHD1Q5VU97 1274 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 OTULINQ96BN8 352 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 OR52E6Q96RD3 313 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 EMILIN2Q9BXX0 1053 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 TMEM98Q9Y2Y6 226 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
CASC4-202ENST00000345795 C15orf38-AP3S2A0A0A6YYH1 394 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 RNASEH1O60930 286 aaKnown RBP13.12□□□□□ -0.31
CASC4-202ENST00000345795 B3GALT4O96024 378 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 PTNP21246 168 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 ADSLP30566 484 aaPredicted RBP13.12□□□□□ -0.31
CASC4-202ENST00000345795 PRKAG1P54619 331 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 LIPEQ05469 1076 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 GTDC1Q4AE62 458 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 IER5LQ5T953 404 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 ARPINQ7Z6K5 226 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 MIPOL1Q8TD10 442 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 JPH3Q8WXH2 748 aaPredicted RBP13.12□□□□□ -0.31
CASC4-202ENST00000345795 AP2M1Q96CW1 435 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 FAM120BQ96EK7 910 aaKnown RBP13.12□□□□□ -0.31
CASC4-202ENST00000345795 OTUB1Q96FW1 271 aaPredicted RBP13.12□□□□□ -0.31
CASC4-202ENST00000345795 FAR2Q96K12 515 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 CACNA2D2Q9NY47 1150 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 ZNF487B1APH4 448 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 NOBOXO60393 691 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 LEFTY1O75610 366 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 ANXA5P08758 320 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 LAG3P18627 525 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 PRKACGP22612 351 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 DGKAP23743 735 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 ITGB8P26012 769 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 SAMD4BQ5PRF9 694 aaKnown RBP13.11□□□□□ -0.31
CASC4-202ENST00000345795 PLD3Q8IV08 490 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 DOK4Q8TEW6 326 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 VPS9D1Q9Y2B5 631 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 VCANP13611 3396 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 TRIM38O00635 465 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 NOL3O60936 208 aaKnown RBP13.11□□□□□ -0.31
CASC4-202ENST00000345795 OR56A5P0C7T3 313 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 ADRA1AP35348 466 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 MAGEA11P43364 429 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 MSLNQ13421 630 aaPredicted RBP13.11□□□□□ -0.31
CASC4-202ENST00000345795 LRRC26Q2I0M4 334 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 DGKKQ5KSL6 1271 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 SYT12Q8IV01 421 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 LIX1Q8N485 282 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 ZBTB2Q8N680 514 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 OR2AP1Q8NGE2 309 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 FOPNLQ96NB1 174 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 OR2AG1Q9H205 316 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 IL26Q9NPH9 171 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 GNPTGQ9UJJ9 305 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 NCOR1O75376 2440 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 CACNA1CQ13936 2221 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 DHRS12A0PJE2 317 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 RNASEH2AO75792 299 aaKnown RBP13.11□□□□□ -0.31
CASC4-202ENST00000345795 HLA-FP30511 346 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 GPR1P46091 355 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 BDKRB1P46663 353 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 DGCR6Q14129 220 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 TCEAL5Q5H9L2 206 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 TMEM31Q5JXX7 168 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 PHC3Q8NDX5 983 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 RDH11Q8TC12 318 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 DGCR6LQ9BY27 220 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 KLHL25Q9H0H3 589 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 STK39Q9UEW8 545 aa13.11□□□□□ -0.31
CASC4-202ENST00000345795 CNOT6Q9ULM6 557 aaKnown RBP13.11□□□□□ -0.31
CASC4-202ENST00000345795 STK16O75716 305 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 RHOP08100 348 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 IGFBP4P22692 258 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 SPAM1P38567 509 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 POLR2JP52435 117 aaKnown RBP13.1□□□□□ -0.31
CASC4-202ENST00000345795 LBX1P52954 281 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 NECAB2Q7Z6G3 386 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 MCOLN3Q8TDD5 553 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 PPP2R3CQ969Q6 453 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 SUV39H2Q9H5I1 410 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 SPATS2LQ9NUQ6 558 aaKnown RBP13.1□□□□□ -0.31
CASC4-202ENST00000345795 TDP1Q9NUW8 608 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 KIF17Q9P2E2 1029 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 ASF1AQ9Y294 204 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 MAGED1Q9Y5V3 778 aaPredicted RBP13.1□□□□□ -0.31
CASC4-202ENST00000345795 MGAT4DA6NG13 374 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 SLC31A1O15431 190 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 HS6ST1O60243 411 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 MMP20O60882 483 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 PABPC1P11940 636 aaKnown RBP13.1□□□□□ -0.31
CASC4-202ENST00000345795 COL6A2P12110 1019 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 HMGA1P17096 107 aaKnown RBP13.1□□□□□ -0.31
CASC4-202ENST00000345795 BPIP17213 487 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 CAPN3P20807 821 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 DPP6P42658 865 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 PSMD8P48556 350 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 CACNG1Q06432 222 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 ABRAXAS2Q15018 415 aa13.1□□□□□ -0.31
CASC4-202ENST00000345795 MPPE1Q53F39 396 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms