RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CCNYL3P0C7X3 344 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 PYGMP11217 842 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 BRAFP15056 766 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 VAV2P52735 878 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 CTSCP53634 463 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 TMPRSS15P98073 1019 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 KLRB1Q12918 225 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 OLIG2Q13516 323 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 GPR18Q14330 331 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 SPARCL1Q14515 664 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 PLCL1Q15111 1095 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 TAF1AQ15573 450 aaPredicted RBP12.17□□□□□ -0.46
SGCA-202ENST00000344627 LONRF2Q1L5Z9 754 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 LACTB2Q53H82 288 aaPredicted RBP12.17□□□□□ -0.46
SGCA-202ENST00000344627 FNBP1LQ5T0N5 605 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 CACHD1Q5VU97 1274 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 IRGCQ6NXR0 463 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 FAM92BQ6ZTR7 304 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 PRSS42Q7Z5A4 293 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 UBL4BQ8N7F7 174 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 SPC24Q8NBT2 197 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 OR4K2Q8NGD2 314 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 STARD8Q92502 1023 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 DCUN1D1Q96GG9 259 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 TRIM4Q9C037 500 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 ZNF768Q9H5H4 540 aaKnown RBP12.17□□□□□ -0.46
SGCA-202ENST00000344627 ASB8Q9H765 288 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 SIDT1Q9NXL6 827 aaKnown RBP12.17□□□□□ -0.46
SGCA-202ENST00000344627 OGFRQ9NZT2 677 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 FKBPLQ9UIM3 349 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 WDR37Q9Y2I8 494 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 REXO2Q9Y3B8 237 aaKnown RBP12.17□□□□□ -0.46
SGCA-202ENST00000344627 PCDHGA6Q9Y5G7 932 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 DNMT3AQ9Y6K1 912 aaPredicted RBP12.17□□□□□ -0.46
SGCA-202ENST00000344627 LOC101059948A0A1B0GTJ6 334 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 C5orf60A6NFR6 353 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 BTNL10A8MVZ5 291 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 C21orf140B9A014 251 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 MKRN2OSH3BPM6 223 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 CRTAMO95727 393 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 FTCDO95954 541 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 FGF5P12034 268 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 CA5AP35218 305 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 LEPRP48357 1165 aaKnown RBP12.16□□□□□ -0.46
SGCA-202ENST00000344627 FOXK1P85037 733 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 KIF5AQ12840 1032 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 UBAP2LQ14157 1087 aaKnown RBP12.16□□□□□ -0.46
SGCA-202ENST00000344627 NFE2L1Q14494 772 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 KRT33BQ14525 404 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 RPE65Q16518 533 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.16□□□□□ -0.46
SGCA-202ENST00000344627 COLEC12Q5KU26 742 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 TCTN3Q6NUS6 607 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 C6orf15Q6UXA7 325 aaPredicted RBP12.16□□□□□ -0.46
SGCA-202ENST00000344627 ARHGEF18Q6ZSZ5 1173 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 C11orf96Q7Z7L8 435 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 ATCAYQ86WG3 371 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 KMT5CQ86Y97 462 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 RASGRP3Q8IV61 690 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 UNC5BQ8IZJ1 945 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 CARFQ8N187 725 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 TXLNBQ8N3L3 684 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 BEND7Q8N7W2 519 aaPredicted RBP12.16□□□□□ -0.46
SGCA-202ENST00000344627 DDHD1Q8NEL9 900 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 NAT14Q8WUY8 206 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 UBXN4Q92575 508 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 RSC1A1Q92681 617 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 ELMO2Q96JJ3 720 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 SPATA13Q96N96 652 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 PPP1R2P1Q96PQ5 205 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 TBL1YQ9BQ87 522 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 ULBP3Q9BZM4 244 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 FAM96AQ9H5X1 160 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 SLC40A1Q9NP59 571 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 IMP3Q9NV31 184 aaKnown RBP12.16□□□□□ -0.46
SGCA-202ENST00000344627 CRLS1Q9UJA2 301 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 PACSIN2Q9UNF0 486 aaPredicted RBP12.16□□□□□ -0.46
SGCA-202ENST00000344627 POLHQ9Y253 713 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 CFAP20Q9Y6A4 193 aaKnown RBP12.16□□□□□ -0.46
SGCA-202ENST00000344627 RPS6KL1Q9Y6S9 549 aa12.16□□□□□ -0.46
SGCA-202ENST00000344627 ZNF106Q9H2Y7 1883 aaKnown RBP12.15□□□□□ -0.46
SGCA-202ENST00000344627 SPTA1P02549 2419 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 GAPDHSO14556 408 aaPredicted RBP12.15□□□□□ -0.46
SGCA-202ENST00000344627 NKX2-8O15522 239 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 SRP72O76094 671 aaKnown RBP12.15□□□□□ -0.46
SGCA-202ENST00000344627 POLBP06746 335 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 PRKAR1AP10644 381 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 RALBP11234 206 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 FECHP22830 423 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 PTPN7P35236 360 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 ADRA1AP35348 466 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 NFKB2Q00653 900 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 PDE1BQ01064 536 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 GSE1Q14687 1217 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 RANBP10Q6VN20 620 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 FAM83HQ6ZRV2 1179 aaPredicted RBP12.15□□□□□ -0.46
SGCA-202ENST00000344627 TIPARPQ7Z3E1 657 aaKnown RBP12.15□□□□□ -0.46
SGCA-202ENST00000344627 PPP1R3BQ86XI6 285 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 SYCE1Q8N0S2 351 aa12.15□□□□□ -0.46
SGCA-202ENST00000344627 TAB3Q8N5C8 712 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms