RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 PTGIRP43119 386 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 RCN1Q15293 331 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 IYDQ6PHW0 289 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 CASP12Q6UXS9 341 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 Q6ZVL8 140 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 EXOC3L1Q86VI1 746 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 PLD3Q8IV08 490 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 MRPS30Q9NP92 439 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 ZNF217O75362 1048 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 NUP107P57740 925 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 SMIM11AP58511 58 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 GTF2H2Q13888 395 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 PRAMEF14Q5SWL7 426 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 GTF2H2CQ6P1K8 395 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 ZYG11AQ6WRX3 759 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 CPNE9Q8IYJ1 553 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 POU5F2Q8N7G0 328 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 TTLQ8NG68 377 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 CDRT15Q96T59 188 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 FEM1AQ9BSK4 669 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 PRKAB1Q9Y478 270 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 A0A1W2PPM1 405 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 TGDSO95455 350 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 METTL18O95568 372 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 SCTRP47872 440 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 SEPHS1P49903 392 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 PITX1P78337 314 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 MLIPQ5VWP3 458 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 FIZ1Q96SL8 496 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 FAM83CQ9BQN1 747 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 SLC46A2Q9BY10 475 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 TMEM98Q9Y2Y6 226 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 RFXANKO14593 260 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 TYRP1P17643 537 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 CTGFP29279 349 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 FSTL4Q6MZW2 842 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 ZFP1Q6P2D0 407 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 ZBTB49Q6ZSB9 765 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 LMO3Q8TAP4 145 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 ZCCHC10Q8TBK6 192 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 KBTBD7Q8WVZ9 684 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 CDKN2AIPNLQ96HQ2 116 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 ZNF607Q96SK3 696 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 HAPLN2Q9GZV7 340 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 RC3H2Q9HBD1 1191 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 EXOSC4Q9NPD3 245 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 COPG2Q9UBF2 871 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 B4GALT6Q9UBX8 382 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 POLR1DQ9Y2S0 133 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 COQ6Q9Y2Z9 468 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 H3BNC9 293 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 KMOO15229 486 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 ITGA2P17301 1181 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 GNAZP19086 355 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 HSPA7P48741 367 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 DUSP3P51452 185 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 EML3Q32P44 896 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 FAM26DQ5JW98 314 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 C9orf64Q5T6V5 341 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 OR4A15Q8NGL6 344 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 OR13C4Q8NGS5 318 aa16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 N4BP2Q86UW6 1770 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-201ENST00000344626 TTC34A8MYJ7 566 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 TRBC1P01850 177 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 ZNF805Q5CZA5 627 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 GJD3Q8N144 294 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 RP9Q8TA86 221 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 OR52E6Q96RD3 313 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 NOL11Q9H8H0 719 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 ATP6V1HQ9UI12 483 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 CDC14AQ9UNH5 594 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 POLR3HQ9Y535 204 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 PCDHGA11Q9Y5H2 935 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 C9J4A7 227 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 SLC25A12O75746 678 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 SLC22A3O75751 556 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 ATP1B2P14415 290 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 VAV1P15498 845 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 LCP2Q13094 533 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 CHIT1Q13231 466 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 RFTN2Q52LD8 501 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 SLC44A4Q53GD3 710 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 FAM182AQ5T1J6 154 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 TIAM2Q8IVF5 1701 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 SAMD14Q8IZD0 417 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 RNF145Q96MT1 663 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 C1orf50Q9BV19 199 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 SLC32A1Q9H598 525 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 KLF15Q9UIH9 416 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 GTF2A1LQ9UNN4 478 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 SPTBN2O15020 2390 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 RGSL1A5PLK6 1076 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 PTPN5P54829 565 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 RPS21P63220 83 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 OGDHQ02218 1023 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 CHRNA6Q15825 494 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 TTMPQ5BVD1 217 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 SLC8B1Q6J4K2 584 aa16.17■□□□□ 0.18
SMARCA4-201ENST00000344626 GATAD2AQ86YP4 633 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms