RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 SLC47A1Q96FL8 570 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 IMP4Q96G21 291 aaKnown RBP9.54□□□□□ -0.88
HOXA1-201ENST00000343060 CAMKK2Q96RR4 588 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 EMILIN2Q9BXX0 1053 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 OR2B2Q9GZK3 357 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 CCDC90BQ9GZT6 254 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 NXF2Q9GZY0 626 aaKnown RBP9.54□□□□□ -0.88
HOXA1-201ENST00000343060 PIF1Q9H611 641 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 ACTR8Q9H981 624 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 FBXO10Q9UK96 956 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 TPRKBQ9Y3C4 175 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 GBF1Q92538 1859 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 SMIM28A0A1B0GU29 152 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 TNFRSF10AO00220 468 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 ANKRD28O15084 1053 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 CHEK2O96017 543 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 MT-ND2P03891 347 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 TXNP10599 105 aaKnown RBP9.54□□□□□ -0.88
HOXA1-201ENST00000343060 MAP2K4P45985 399 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 TUBA1BP68363 451 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 SOX4Q06945 474 aaPredicted RBP9.54□□□□□ -0.88
HOXA1-201ENST00000343060 ARHGAP1Q07960 439 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 RAPSNQ13702 412 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 KEAP1Q14145 624 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 NPTX1Q15818 432 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 PLA2G4EQ3MJ16 856 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 C6orf136Q5SQH8 315 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 LAIR1Q6GTX8 287 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 PRR23CQ6ZRP0 262 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 TUBA1AQ71U36 451 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 LDB1Q86U70 411 aaPredicted RBP9.54□□□□□ -0.88
HOXA1-201ENST00000343060 CLIP4Q8N3C7 705 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 FBXO39Q8N4B4 442 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 PNPLA1Q8N8W4 532 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 MCFD2Q8NI22 146 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 HTRA1Q92743 480 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 FATE1Q969F0 183 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 LGALS12Q96DT0 336 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 KLRG1Q96E93 195 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 DERL2Q9GZP9 239 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 NXF3Q9H4D5 531 aaKnown RBP9.54□□□□□ -0.88
HOXA1-201ENST00000343060 ACTL8Q9H568 366 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 EPS8L2Q9H6S3 715 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 CCNB1IP1Q9NPC3 277 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 CRTAC1Q9NQ79 661 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.54□□□□□ -0.88
HOXA1-201ENST00000343060 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.54□□□□□ -0.88
HOXA1-201ENST00000343060 TIMM22Q9Y584 194 aa9.54□□□□□ -0.88
HOXA1-201ENST00000343060 OR2A25A4D2G3 310 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 ASB14A6NK59 587 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 HS6ST1O60243 411 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 MAN1A2O60476 641 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 SCELO95171 688 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 MLYCDO95822 493 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 PEX11BO96011 259 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 USP17L7P0C7H9 530 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 HOXD8P13378 290 aaPredicted RBP9.53□□□□□ -0.88
HOXA1-201ENST00000343060 SPNP16150 400 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 FSHRP23945 695 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 RPS12P25398 132 aaKnown RBP9.53□□□□□ -0.88
HOXA1-201ENST00000343060 CASP2P42575 452 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 NKX2-5P52952 324 aaPredicted RBP9.53□□□□□ -0.88
HOXA1-201ENST00000343060 LSM3P62310 102 aaKnown RBP9.53□□□□□ -0.88
HOXA1-201ENST00000343060 PNCKQ6P2M8 343 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 DPP9Q86TI2 863 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 HEATR4Q86WZ0 1026 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 HIPK1Q86Z02 1210 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 ARL10Q8N8L6 244 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 GIPC2Q8TF65 315 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 PEX13Q92968 403 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 POP5Q969H6 163 aaKnown RBP9.53□□□□□ -0.88
HOXA1-201ENST00000343060 TADA1Q96BN2 335 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 PPM1MQ96MI6 270 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 SNX18Q96RF0 628 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 AARSD1Q9BTE6 412 aaKnown RBP9.53□□□□□ -0.88
HOXA1-201ENST00000343060 MED10Q9BTT4 135 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 NOL6Q9H6R4 1146 aaKnown RBP9.53□□□□□ -0.88
HOXA1-201ENST00000343060 TM9SF3Q9HD45 589 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 ACOT13Q9NPJ3 140 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 SEMA4BQ9NPR2 832 aaPredicted RBP9.53□□□□□ -0.88
HOXA1-201ENST00000343060 ABCB10Q9NRK6 738 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 TMEM30AQ9NV96 361 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 PCTPQ9UKL6 214 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 PCDHB14Q9Y5E9 798 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 CRCPO75575 148 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 CNMDO75829 334 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 KRT75O95678 551 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 GOT2P00505 430 aaKnown RBP9.53□□□□□ -0.88
HOXA1-201ENST00000343060 RETP07949 1114 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 SLC2A3P11169 496 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 CXCR2P25025 360 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 LILRA4P59901 499 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 PRKCDQ05655 676 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 KRR1Q13601 381 aaKnown RBP9.53□□□□□ -0.88
HOXA1-201ENST00000343060 TTLL4Q14679 1199 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 KIAA0040Q15053 153 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 ZNF404Q494X3 552 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 UBE2UQ5VVX9 321 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 NOTUMQ6P988 496 aa9.53□□□□□ -0.88
HOXA1-201ENST00000343060 TXNDC11Q6PKC3 985 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms