RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CDK3Q00526 305 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 ABRQ12979 859 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 TUBB2AQ13885 445 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 UGP2Q16851 508 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 CHRFAM7AQ494W8 412 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 PYCR3Q53H96 274 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 ZFYVE27Q5T4F4 411 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 IRGCQ6NXR0 463 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 DOK6Q6PKX4 331 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 PRSS57Q6UWY2 283 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 TFAP2DQ7Z6R9 452 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 CHERPQ8IWX8 916 aaKnown RBP10.83□□□□□ -0.68
ATXN3-201ENST00000340660 EPS8L3Q8TE67 593 aaKnown RBP10.83□□□□□ -0.68
ATXN3-201ENST00000340660 CPT1BQ92523 772 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 ZNF501Q96CX3 271 aaPredicted RBP10.83□□□□□ -0.68
ATXN3-201ENST00000340660 CLIP3Q96DZ5 547 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 LMF1Q96S06 567 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 MAP3K3Q99759 626 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 TUBB2BQ9BVA1 445 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 ATP13A1Q9HD20 1204 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 KCND1Q9NSA2 647 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 CRIM1Q9NZV1 1036 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 SLC12A6Q9UHW9 1150 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 FBXL4Q9UKA2 621 aa10.83□□□□□ -0.68
ATXN3-201ENST00000340660 PTRH2Q9Y3E5 179 aaKnown RBP10.83□□□□□ -0.68
ATXN3-201ENST00000340660 DYSFO75923 2080 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 FAM157CP0CG43 387 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 UBA7P41226 1012 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 ARSKQ6UWY0 536 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 CCDC71Q8IV32 467 aaPredicted RBP10.82□□□□□ -0.68
ATXN3-201ENST00000340660 ZNF683Q8IZ20 524 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 LRRC75A-AS1Q8N1F1 130 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 FNIP1Q8TF40 1166 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 ARHGEF2Q92974 986 aaKnown RBP10.82□□□□□ -0.68
ATXN3-201ENST00000340660 DMRTB1Q96MA1 342 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 DHRS4Q9BTZ2 278 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 DNAI2Q9GZS0 605 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 LHPPQ9H008 270 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 MIS12Q9H081 205 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 UCK1Q9HA47 277 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 HESX1Q9UBX0 185 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 CBLCQ9ULV8 474 aa10.82□□□□□ -0.68
ATXN3-201ENST00000340660 PCYT1BQ9Y5K3 369 aaPredicted RBP10.82□□□□□ -0.68
ATXN3-201ENST00000340660 USF3Q68DE3 2245 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 TSPAN11A1L157 253 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 C9J4A7 227 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 INSIG1O15503 277 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 PIGNO95427 931 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 ERBB2P04626 1255 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 UMODP07911 640 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 SETSIPP0DME0 302 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 PVRP15151 417 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 ABOP16442 354 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 FOLR3P41439 243 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 CACNG1Q06432 222 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 UBAP2Q5T6F2 1119 aaKnown RBP10.81□□□□□ -0.68
ATXN3-201ENST00000340660 IRAK1BP1Q5VVH5 260 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 ERAP2Q6P179 960 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 LIPIQ6XZB0 460 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 TMEM26Q6ZUK4 368 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 C11orf96Q7Z7L8 435 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 ZSWIM9Q86XI8 627 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 SLC35F5Q8WV83 523 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 FAM149B1Q96BN6 582 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 WDR89Q96FK6 387 aaPredicted RBP10.81□□□□□ -0.68
ATXN3-201ENST00000340660 ZDHHC12Q96GR4 267 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 AK8Q96MA6 479 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 CISHQ9NSE2 258 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 PPP4R2Q9NY27 417 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 EPHA6Q9UF33 1036 aa10.81□□□□□ -0.68
ATXN3-201ENST00000340660 C17orf113A0A1B0GUU1 675 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 CFAP69A5D8W1 941 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 CNOT3O75175 753 aaKnown RBP10.8□□□□□ -0.68
ATXN3-201ENST00000340660 LCA5LO95447 670 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 TSPAN12O95859 305 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 F10P00742 488 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 SPTBP11277 2137 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 KIR2DL3P43628 341 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 CTSCP53634 463 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 HSF1Q00613 529 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 POLD3Q15054 466 aaPredicted RBP10.8□□□□□ -0.68
ATXN3-201ENST00000340660 LEKR1Q6ZMV7 388 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 MARK2Q7KZI7 788 aaKnown RBP10.8□□□□□ -0.68
ATXN3-201ENST00000340660 D2HGDHQ8N465 521 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 RASSF8Q8NHQ8 419 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 UBXN4Q92575 508 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 C8orf76Q96K31 380 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 HERPUD2Q9BSE4 406 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 MPP6Q9NZW5 540 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 ZNF212Q9UDV6 495 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 ATP8A1Q9Y2Q0 1164 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 TMEM98Q9Y2Y6 226 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 SNX10Q9Y5X0 201 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 SEC16AO15027 2179 aa10.8□□□□□ -0.68
ATXN3-201ENST00000340660 CCDC88CQ9P219 2028 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 SYNJ2BP-COX16A0A087WUM0 186 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 KIR2DS5A0A0G2JLQ3 304 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 A0A0G2JNG1 304 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 ILVBLA1L0T0 632 aa10.79□□□□□ -0.68
ATXN3-201ENST00000340660 SOWAHDA6NJG2 315 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms