RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CHST9Q7L1S5 443 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 OR56A4Q8NGH8 313 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 EID2BQ96D98 161 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 TMEM74Q96NL1 305 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 TM6SF2Q9BZW4 377 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 VPS9D1Q9Y2B5 631 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 COMMD10Q9Y6G5 202 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 COMMD3-BMI1R4GMX3 469 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 A0A1W2PP18 115 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 ARHGAP10A1A4S6 786 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 ARPC2O15144 300 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 PFDN6O15212 129 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 HTRA2O43464 458 aaPredicted RBP16.09■□□□□ 0.17
LITAF-201ENST00000339430 KLK8O60259 260 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 MLYCDO95822 493 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 PRR35P0CG20 571 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 CCR2P41597 374 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 ZFP36L2P47974 494 aaKnown RBP16.09■□□□□ 0.17
LITAF-201ENST00000339430 RHOAP61586 193 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 TGFBIQ15582 683 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 MYLK3Q32MK0 819 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 TIGD2Q4W5G0 525 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 TXNDC11Q6PKC3 985 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 ERMP1Q7Z2K6 904 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 LYSMD3Q7Z3D4 306 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 SPATA19Q7Z5L4 167 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 FNDC5Q8NAU1 212 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 GRIN3AQ8TCU5 1115 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 NUDT8Q8WV74 236 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.09■□□□□ 0.17
LITAF-201ENST00000339430 ZUFSPQ96AP4 578 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 OSBPL11Q9BXB4 747 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 GPR63Q9BZJ6 419 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 CCM2LQ9NUG4 571 aaPredicted RBP16.09■□□□□ 0.17
LITAF-201ENST00000339430 ARMC1Q9NVT9 282 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 LHX3Q9UBR4 397 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 USP22Q9UPT9 525 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 PCDHA9Q9Y5H5 950 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 PDE4DIPQ5VU43 2346 aa16.09■□□□□ 0.17
LITAF-201ENST00000339430 CCDC154A6NI56 674 aa16.08■□□□□ 0.17
LITAF-201ENST00000339430 K7ERQ8 282 aa16.08■□□□□ 0.17
LITAF-201ENST00000339430 HSD17B1P14061 328 aa16.08■□□□□ 0.17
LITAF-201ENST00000339430 ERVPABLB-1P60509 514 aa16.08■□□□□ 0.17
LITAF-201ENST00000339430 SMAD3P84022 425 aaKnown RBP16.08■□□□□ 0.17
LITAF-201ENST00000339430 PLOD1Q02809 727 aaPredicted RBP16.08■□□□□ 0.17
LITAF-201ENST00000339430 RCAN2Q14206 197 aa16.08■□□□□ 0.17
LITAF-201ENST00000339430 XKR7Q5GH72 579 aa16.08■□□□□ 0.17
LITAF-201ENST00000339430 OGFOD2Q6N063 350 aa16.08■□□□□ 0.17
LITAF-201ENST00000339430 LETMD1Q6P1Q0 360 aa16.08■□□□□ 0.17
LITAF-201ENST00000339430 TMEM125Q96AQ2 219 aa16.08■□□□□ 0.17
LITAF-201ENST00000339430 ZFRQ96KR1 1074 aaKnown RBP16.08■□□□□ 0.17
LITAF-201ENST00000339430 C1QTNF3Q9BXJ4 246 aa16.08■□□□□ 0.17
LITAF-201ENST00000339430 CAAP1Q9H8G2 361 aa16.08■□□□□ 0.17
LITAF-201ENST00000339430 TNRC18O15417 2968 aaPredicted RBP16.08■□□□□ 0.16
LITAF-201ENST00000339430 RFXAPO00287 272 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 INPP4BO15327 924 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 SYNCRIPO60506 623 aaKnown RBP16.08■□□□□ 0.16
LITAF-201ENST00000339430 KATNA1O75449 491 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 SLC22A3O75751 556 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 CKMP06732 381 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 PSMA3P25788 255 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 PSMA4P25789 261 aaKnown RBP16.08■□□□□ 0.16
LITAF-201ENST00000339430 CA5AP35218 305 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 GSK3BP49841 420 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 HTR6P50406 440 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 ZXDBP98169 803 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 APOFQ13790 326 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 INPP5AQ14642 412 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 PLA2G4EQ3MJ16 856 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 KRT80Q6KB66 452 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 FAM151BQ6UXP7 276 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 FRA10AC1Q70Z53 315 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 RTL10Q7L3V2 364 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 CBR4Q8N4T8 237 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 ZFP28Q8NHY6 868 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 WFDC5Q8TCV5 224 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 KCNJ9Q92806 393 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 DGCR14Q96DF8 476 aaKnown RBP16.08■□□□□ 0.16
LITAF-201ENST00000339430 NUSAP1Q9BXS6 441 aaKnown RBP16.08■□□□□ 0.16
LITAF-201ENST00000339430 TRIM15Q9C019 465 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 ALG2Q9H553 416 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 VCX3AQ9NNX9 186 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 INTS7Q9NVH2 962 aaKnown RBP16.08■□□□□ 0.16
LITAF-201ENST00000339430 DUS2Q9NX74 493 aaKnown RBP16.08■□□□□ 0.16
LITAF-201ENST00000339430 HACD3Q9P035 362 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 ACTR3BQ9P1U1 418 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 DNMT3BQ9UBC3 853 aaKnown RBP16.08■□□□□ 0.16
LITAF-201ENST00000339430 PKP3Q9Y446 797 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 ZNF711Q9Y462 761 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 CPQQ9Y646 472 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 SLC30A1Q9Y6M5 507 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 V9GYQ6 96 aa16.08■□□□□ 0.16
LITAF-201ENST00000339430 OLFM2O95897 454 aa16.07■□□□□ 0.16
LITAF-201ENST00000339430 PTPN2P17706 415 aa16.07■□□□□ 0.16
LITAF-201ENST00000339430 RPL10P27635 214 aaKnown RBP16.07■□□□□ 0.16
LITAF-201ENST00000339430 IL12AP29459 219 aa16.07■□□□□ 0.16
LITAF-201ENST00000339430 NRIP1P48552 1158 aa16.07■□□□□ 0.16
LITAF-201ENST00000339430 CLCN7P51798 805 aa16.07■□□□□ 0.16
LITAF-201ENST00000339430 POLR2JP52435 117 aaKnown RBP16.07■□□□□ 0.16
LITAF-201ENST00000339430 TXNL4AP83876 142 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms