RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 PCDHB1Q9Y5F3 818 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 COMMD10Q9Y6G5 202 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 PLXNB3Q9ULL4 1909 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 GOLGA4Q13439 2230 aaKnown RBP7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 TBC1D3BA6NDS4 549 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 SYCE1LA8MT33 242 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 SLC9A3R1O14745 358 aaPredicted RBP7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 THRAP10827 490 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 HGFP14210 728 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 GNAZP19086 355 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 CD9P21926 228 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 RPS3P23396 243 aaKnown RBP eCLIP7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 AKT1P31749 480 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 NSG1P42857 185 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 PTDSS1P48651 473 aaKnown RBP7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 CTSCP53634 463 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 INHBCP55103 352 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 BOP1Q14137 746 aaKnown RBP7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 DMC1Q14565 340 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 GPR33Q49SQ1 333 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 ZNF805Q5CZA5 627 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 KANK2Q63ZY3 851 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 BRAT1Q6PJG6 821 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 LIPIQ6XZB0 460 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 EP400NLQ6ZTU2 488 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 FRA10AC1Q70Z53 315 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 CFAP61Q8NHU2 1237 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 ACTRT2Q8TDY3 377 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 ZNF483Q8TF39 744 aaPredicted RBP7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 TUBGCP3Q96CW5 907 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 MYADMQ96S97 322 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 RTKNQ9BST9 563 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 TRMOQ9BU70 441 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 C1orf50Q9BV19 199 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 MMADHCQ9H3L0 296 aaPredicted RBP7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 FAM83DQ9H4H8 585 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 SPATS2LQ9NUQ6 558 aaKnown RBP7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 CACNA2D2Q9NY47 1150 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 DEC1Q9P2X7 70 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 PPM1HQ9ULR3 514 aa7.28□□□□□ -1.24
SRFBP1-201ENST00000339397 UPK3BL1B0FP48 263 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 UPK3BL2E5RIL1 263 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 PSMD12O00232 456 aaPredicted RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 FFAR3O14843 346 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 GPR42O15529 346 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 HOXC11O43248 304 aaPredicted RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 CCNT2O60583 730 aaKnown RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 PSMG1O95456 288 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 ADH1CP00326 375 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 RPSAP08865 295 aaKnown RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 ATP1B2P14415 290 aaPredicted RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 HK2P52789 917 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 THOP1P52888 689 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 POLR2LP62875 67 aaKnown RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 MS4A2Q01362 244 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 HYAL1Q12794 435 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 FASTKQ14296 549 aaKnown RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 ZNF234Q14588 700 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 DNAL1Q4LDG9 190 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 FNDC3BQ53EP0 1204 aaKnown RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 PARM1Q6UWI2 310 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 Q6ZSR9 355 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 GOLGA7Q7Z5G4 137 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 RETREG3Q86VR2 466 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 MMAAQ8IVH4 418 aaKnown RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 OR4F6Q8NGB9 312 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 RP9Q8TA86 221 aaKnown RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 PDLIM5Q96HC4 596 aaKnown RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 FAM129BQ96TA1 746 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 TTC1Q99614 292 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 EGFL8Q99944 293 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 TMEM79Q9BSE2 394 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 SLC2A11Q9BYW1 496 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 ZNHIT2Q9UHR6 403 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 POMPQ9Y244 141 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 IGLV3-16A0A075B6K0 115 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 EIF4E1BA6NMX2 242 aaKnown RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 STX16O14662 325 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 CRCPO75575 148 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 ESRRBO95718 433 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 CAPN1P07384 714 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 TCF3P15923 654 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 XRCC1P18887 633 aaPredicted RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 VIPR1P32241 457 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 OPRD1P41143 372 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 IL12RB1P42701 662 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 ACTR3P61158 418 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 CEACAM7Q14002 265 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 PTK2BQ14289 1009 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 ACOX1Q15067 660 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 VPS26BQ4G0F5 336 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 HABP4Q5JVS0 413 aaKnown RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 HENMT1Q5T8I9 393 aaKnown RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 TECPR1Q7Z6L1 1165 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 SUGP1Q8IWZ8 645 aaKnown RBP7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 MYO1HQ8N1T3 1032 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 KYQ8NBH2 561 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 ARRDC3Q96B67 414 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 RHBDF1Q96CC6 855 aa7.27□□□□□ -1.25
SRFBP1-201ENST00000339397 MTFMTQ96DP5 389 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms