RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 BCKDHBP21953 392 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 MAPK9P45984 424 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 BOP1Q14137 746 aaKnown RBP14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 GBX1Q14549 363 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 N4BP2L1Q5TBK1 243 aaPredicted RBP14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 CRTC3Q6UUV7 619 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 TMEM207Q6UWW9 146 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 Q6ZSR6 202 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 NEK10Q6ZWH5 1172 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 AMZ2Q86W34 360 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 GALNT13Q8IUC8 556 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 MFSD2AQ8NA29 543 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 OR2L2Q8NH16 312 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 RDH11Q8TC12 318 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 DNASE2BQ8WZ79 361 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 NELL1Q92832 810 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 GLMNQ92990 594 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 LINGO1Q96FE5 620 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 TIMM29Q9BSF4 260 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 AASDHPPTQ9NRN7 309 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 IGSF5Q9NSI5 407 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 GALPQ9UBC7 116 aa14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 EIF2B4Q9UI10 523 aaKnown RBP14.29□□□□□ -0.12
NIPAL3-202ENST00000339255 PI4KAP42356 2102 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 SDK1Q7Z5N4 2213 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 PRSS38A1L453 326 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 MGAT4DA6NG13 374 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 TMEM202A6NGA9 273 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 SLCO2B1O94956 709 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 TSPAN12O95859 305 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 RBP1P09455 135 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 AVPR2P30518 371 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 NUBP1P53384 320 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 PGGT1BP53609 377 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 HSPA14Q0VDF9 509 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 RPA4Q13156 261 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 LRP8Q14114 963 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 CDHR3Q6ZTQ4 885 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 CPNE9Q8IYJ1 553 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 MYO1HQ8N1T3 1032 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 PLD6Q8N2A8 252 aaKnown RBP14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 BEND7Q8N7W2 519 aaPredicted RBP14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 OR13H1Q8NG92 308 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 RHEBL1Q8TAI7 183 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 NAT14Q8WUY8 206 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 EEF1AKMT1Q8WVE0 214 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 ANKRD49Q8WVL7 239 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 NXNL1Q96CM4 212 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 SLC30A3Q99726 388 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 MRPL57Q9BQC6 102 aaKnown RBP14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 MRPL46Q9H2W6 279 aaKnown RBP14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 FGF22Q9HCT0 170 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 KLQ9UEF7 1012 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 CA5BQ9Y2D0 317 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 ZNF318Q5VUA4 2279 aa14.28□□□□□ -0.12
NIPAL3-202ENST00000339255 FANCMQ8IYD8 2048 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 TNFRSF10AO00220 468 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 PLIN3O60664 434 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 GPC4O75487 556 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 POP7O75817 140 aaKnown RBP14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 TOP3BO95985 862 aaKnown RBP14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 CD1DP15813 335 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 CD38P28907 300 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 ARHGAP8P85298 464 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 DMPKQ09013 629 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 MPP2Q14168 576 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 ZNF658BQ4V348 819 aaPredicted RBP14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 HHATQ5VTY9 493 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 C11orf96Q7Z7L8 435 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 ADAMTSL2Q86TH1 951 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 TMEFF1Q8IYR6 380 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 ANKRD42Q8N9B4 389 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 DENND1AQ8TEH3 1009 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 KIAA1191Q96A73 305 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 KLHDC7BQ96G42 594 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 SLC6A18Q96N87 628 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 GPR78Q96P69 363 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 FAM111AQ96PZ2 611 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 DPEP2Q9H4A9 486 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 TFB2MQ9H5Q4 396 aaKnown RBP14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 INTS9Q9NV88 658 aaKnown RBP14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 ZNHIT2Q9UHR6 403 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 RUVBL2Q9Y230 463 aaKnown RBP14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 DGKBQ9Y6T7 804 aa14.27□□□□□ -0.12
NIPAL3-202ENST00000339255 SPTY2D1-AS1A0A0U1RR47 76 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 PROCP04070 461 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 THEGLP0DJG4 465 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 TFEBP19484 476 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 ETV4P43268 484 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 DLG1Q12959 904 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 PYCR3Q53H96 274 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 PMS2CLQ68D20 193 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 LVRNQ6Q4G3 990 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 ENPP7Q6UWV6 458 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 SLC22A15Q8IZD6 547 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 FSTL5Q8N475 847 aaPredicted RBP14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 C1orf216Q8TAB5 229 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 STAG3L4Q8TBR4 150 aa14.26□□□□□ -0.13
NIPAL3-202ENST00000339255 SKA1Q96BD8 255 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms