RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 CENPEQ02224 2701 aa11.22□□□□□ -0.61
CSMD2-202ENST00000338325 CELSR2Q9HCU4 2923 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 A0A087X0T9 212 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 ZNF185O15231 689 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 SERPING1P05155 500 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 FAM228BP0C875 321 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 KDELR1P24390 212 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 COL8A1P27658 744 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 HMGCLP35914 325 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 VAV2P52735 878 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 CTSCP53634 463 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 XRCC4Q13426 336 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 NFE2L1Q14494 772 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 ANO6Q4KMQ2 910 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 LDLRAP1Q5SW96 308 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 PLEKHS1Q5SXH7 462 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 LCN10Q6JVE6 187 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 ARMC6Q6NXE6 501 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 ALKBH5Q6P6C2 394 aaKnown RBP11.21□□□□□ -0.61
CSMD2-202ENST00000338325 RASGEF1AQ8N9B8 481 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 GLIS1Q8NBF1 620 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 SPATA22Q8NHS9 363 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 CPT1BQ92523 772 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 RAPGEF5Q92565 580 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 SYN2Q92777 582 aaPredicted RBP11.21□□□□□ -0.61
CSMD2-202ENST00000338325 NAP1L5Q96NT1 182 aaPredicted RBP11.21□□□□□ -0.61
CSMD2-202ENST00000338325 BPIFA3Q9BQP9 254 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 NLNQ9BYT8 704 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 FANCEQ9HB96 536 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 GPR83Q9NYM4 423 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 CTTNBP2NLQ9P2B4 639 aa11.21□□□□□ -0.61
CSMD2-202ENST00000338325 ERRFI1Q9UJM3 462 aaPredicted RBP11.21□□□□□ -0.61
CSMD2-202ENST00000338325 CFAP20Q9Y6A4 193 aaKnown RBP11.21□□□□□ -0.61
CSMD2-202ENST00000338325 DNMT3AQ9Y6K1 912 aaPredicted RBP11.21□□□□□ -0.61
CSMD2-202ENST00000338325 A0A1W2PQJ5 194 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 OR6C74A6NCV1 312 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 WIPF3A6NGB9 483 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 A6NL46 340 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 SMTNL1A8MU46 457 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 ZNF487B1APH4 448 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 MEN1O00255 615 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 PPP1R12AO14974 1030 aaPredicted RBP11.2□□□□□ -0.62
CSMD2-202ENST00000338325 MT-CYBP00156 380 aaPredicted RBP11.2□□□□□ -0.62
CSMD2-202ENST00000338325 LDLRP01130 860 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 PBLDP30039 288 aaPredicted RBP11.2□□□□□ -0.62
CSMD2-202ENST00000338325 SPAM1P38567 509 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 KPNA2P52292 529 aaKnown RBP11.2□□□□□ -0.62
CSMD2-202ENST00000338325 RRADP55042 308 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 ITGA1P56199 1179 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 ABRQ12979 859 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 PDK1Q15118 436 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 NR6A1Q15406 480 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 NFKBIBQ15653 356 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 FAM69BQ5VUD6 431 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 ZDHHC20Q5W0Z9 365 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 SLC9A4Q6AI14 798 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 TMEM220Q6QAJ8 160 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 FAM198BQ6UWH4 519 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 MED25Q71SY5 747 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 TMEM102Q8N9M5 508 aaPredicted RBP11.2□□□□□ -0.62
CSMD2-202ENST00000338325 DDHD1Q8NEL9 900 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 DTX3LQ8TDB6 740 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.2□□□□□ -0.62
CSMD2-202ENST00000338325 CLIP3Q96DZ5 547 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 TCTN2Q96GX1 697 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 OLFM3Q96PB7 478 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 SMAD5Q99717 465 aaKnown RBP11.2□□□□□ -0.62
CSMD2-202ENST00000338325 TLR10Q9BXR5 811 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 TRABDQ9H4I3 376 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 GLOD4Q9HC38 313 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 IL26Q9NPH9 171 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.2□□□□□ -0.62
CSMD2-202ENST00000338325 UVRAGQ9P2Y5 699 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 LCMT1Q9UIC8 334 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 SPTBP11277 2137 aa11.2□□□□□ -0.62
CSMD2-202ENST00000338325 A0A0A6YYK5 440 aaPredicted RBP11.19□□□□□ -0.62
CSMD2-202ENST00000338325 OR2AG2A6NM03 316 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 APOL1O14791 398 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 PMPCBO75439 489 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 CAPN1P07384 714 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 RORAP35398 523 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 ARCN1P48444 511 aaKnown RBP11.19□□□□□ -0.62
CSMD2-202ENST00000338325 ATP1A4Q13733 1029 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 NR1I3Q14994 352 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 PPP2R5EQ16537 467 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 GPRC6AQ5T6X5 926 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 PRAMEF17Q5VTA0 474 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 METRNLQ641Q3 311 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 DUS1LQ6P1R4 473 aaKnown RBP11.19□□□□□ -0.62
CSMD2-202ENST00000338325 FAM151BQ6UXP7 276 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 SYTL1Q8IYJ3 562 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 IQCKQ8N0W5 287 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 ZBTB2Q8N680 514 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 ZFPM2Q8WW38 1151 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 SGSM3Q96HU1 749 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 C12orf66Q96MD2 445 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 INSM2Q96T92 566 aaPredicted RBP11.19□□□□□ -0.62
CSMD2-202ENST00000338325 WWP1Q9H0M0 922 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 KIR3DX1Q9H7L2 352 aa11.19□□□□□ -0.62
CSMD2-202ENST00000338325 SLC24A2Q9UI40 661 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms