RNA–Protein interactions for RNA: ENST00000337907.7

RERE-201, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 8,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-201ENST00000337907 C15orf59Q2T9L4 293 aaPredicted RBP12.6□□□□□ -0.39
RERE-201ENST00000337907 MTX3Q5HYI7 312 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 PLPP4Q5VZY2 271 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 SMPDL3BQ92485 455 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 USP20Q9Y2K6 914 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 ITPKAP23677 461 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 SYCE2Q6PIF2 218 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 USP43Q70EL4 1123 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 CNDP2Q96KP4 475 aaKnown RBP12.6□□□□□ -0.39
RERE-201ENST00000337907 MTFR1LQ9H019 292 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 POLMQ9NP87 494 aaPredicted RBP12.6□□□□□ -0.39
RERE-201ENST00000337907 ABCC3O15438 1527 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 RBM47A0AV96 593 aaKnown RBP12.6□□□□□ -0.39
RERE-201ENST00000337907 CLEC3AO75596 197 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 ZBTB11O95625 1053 aaPredicted RBP12.6□□□□□ -0.39
RERE-201ENST00000337907 SMIM10L2AP0DMW4 78 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 SMIM10L2BP0DMW5 78 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 GTF2IRD2BQ6EKJ0 949 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 USP30Q70CQ3 517 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 USP50Q70EL3 339 aaPredicted RBP12.6□□□□□ -0.39
RERE-201ENST00000337907 OTOP1Q7RTM1 612 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 GTF2IRD2Q86UP8 949 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 MAP4K3Q8IVH8 894 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 ARL10Q8N8L6 244 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 TTLQ8NG68 377 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 LCN9Q8WX39 176 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 RAB11FIP5Q9BXF6 653 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 TRPV4Q9HBA0 871 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 SDHAF3Q9NRP4 125 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 ADGRB3O60242 1522 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 C5orf60A6NFR6 353 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 ZBTB22O15209 634 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 DHX15O43143 795 aaKnown RBP12.6□□□□□ -0.39
RERE-201ENST00000337907 HCAR3P49019 387 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 FOXM1Q08050 763 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 ARMCX6Q7L4S7 300 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 RBM23Q86U06 439 aaKnown RBP12.6□□□□□ -0.39
RERE-201ENST00000337907 CFAP206Q8IYR0 622 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 ZSCAN1Q8NBB4 408 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 ZNF570Q96NI8 536 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 CLTCL1P53675 1640 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 PRR36Q9H6K5 1346 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 ZSCAN5BA6NJL1 495 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 CPNE3O75131 537 aaKnown RBP12.6□□□□□ -0.39
RERE-201ENST00000337907 TCEA1P23193 301 aaKnown RBP12.6□□□□□ -0.39
RERE-201ENST00000337907 AQP1P29972 269 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 IDNKQ5T6J7 187 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 SMARCD3Q6STE5 483 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 CEP97Q8IW35 865 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 SUN5Q8TC36 379 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 TP53INP1Q96A56 240 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 PCDH18Q9HCL0 1135 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 DNAJC28Q9NX36 388 aa12.6□□□□□ -0.39
RERE-201ENST00000337907 ZNF878C9JN71 531 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 OR1F1O43749 312 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 GABRR2P28476 465 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 MATKP42679 507 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 SNTA1Q13424 505 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 ATAD1Q8NBU5 361 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 STYXQ8WUJ0 223 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 BTN2A3PQ96KV6 586 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.59□□□□□ -0.39
RERE-201ENST00000337907 HNRNPLP14866 589 aaKnown RBP eCLIP12.59□□□□□ -0.394e-7■■■■■ 27.8
RERE-201ENST00000337907 ACSL1P33121 698 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 BEX3Q00994 111 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 SLC5A9Q2M3M2 681 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 CUZD1Q86UP6 607 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 DNAAF1Q8NEP3 725 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 FCGR1BQ92637 280 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 MKKSQ9NPJ1 570 aaPredicted RBP12.59□□□□□ -0.39
RERE-201ENST00000337907 C11orf16Q9NQ32 467 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 ARL5AQ9Y689 179 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 F8VP50 259 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 BUD23O43709 281 aaKnown RBP12.59□□□□□ -0.39
RERE-201ENST00000337907 GOT1P17174 413 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 EPHA3P29320 983 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 HTR7P34969 479 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 RGS19P49795 217 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 ISLR2Q6UXK2 745 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 LRRC20Q8TCA0 184 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 SNRNP25Q9BV90 132 aaKnown RBP12.59□□□□□ -0.39
RERE-201ENST00000337907 IFT27Q9BW83 186 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 ARHGEF4Q9NR80 690 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 THUMPD1Q9NXG2 353 aaKnown RBP12.59□□□□□ -0.39
RERE-201ENST00000337907 SPATA31A1Q5TZJ5 1347 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 TMEM150CB9EJG8 249 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 PGLSO95336 258 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 IFNA7P01567 189 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 ADCYAP1R1P41586 468 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 ROR2Q01974 943 aaKnown RBP12.59□□□□□ -0.39
RERE-201ENST00000337907 RNASEH2BQ5TBB1 312 aaKnown RBP12.59□□□□□ -0.39
RERE-201ENST00000337907 HECTD2Q5U5R9 776 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 SLC29A4Q7RTT9 530 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 MON1AQ86VX9 555 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 IFNL1Q8IU54 200 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 PNPT1Q8TCS8 783 aaKnown RBP12.59□□□□□ -0.39
RERE-201ENST00000337907 ZBED6CLQ96FA7 236 aaPredicted RBP12.59□□□□□ -0.39
RERE-201ENST00000337907 GORASP1Q9BQQ3 440 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 RIOX1Q9H6W3 641 aa12.59□□□□□ -0.39
RERE-201ENST00000337907 GRHL1Q9NZI5 618 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms