RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 LRG1P02750 347 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 COL6A2P12110 1019 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 EPB42P16452 691 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 TYMPP19971 482 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 NNMTP40261 264 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 SLC11A1P49279 550 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 PRIM2P49643 509 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 OR4D2P58180 307 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 MYBPC1Q00872 1141 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 SP3Q02447 781 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 KRT33BQ14525 404 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 DEFB115Q30KQ5 88 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 KCTD8Q6ZWB6 473 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 LIX1Q8N485 282 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 SORCS1Q8WY21 1168 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 ING5Q8WYH8 240 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 RELTQ969Z4 430 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 SUSD3Q96L08 255 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 OSBPL11Q9BXB4 747 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 C6orf62Q9GZU0 229 aaPredicted RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 IGSF5Q9NSI5 407 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 RNF186Q9NXI6 227 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 RAPGEFL1Q9UHV5 662 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 LEF1Q9UJU2 399 aaPredicted RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 A0A087WXM4 84 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 A0A1W2PRU2 124 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 NEDD8-MDP1E9PL57 170 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 FBP2O00757 339 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 HTRA2O43464 458 aaPredicted RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 XPNPEP2O43895 674 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 DFNA5O60443 496 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 H6PDO95479 791 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 BCL10O95999 233 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 SBK3P0C264 359 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 BMP1P13497 986 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 IDO1P14902 403 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 CSKP41240 450 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 HSPA13P48723 471 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 TTPAP49638 278 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 NDST2P52849 883 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 PRKAG1P54619 331 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 AIF1P55008 147 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 YBX1P67809 324 aaKnown RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 NOGQ13253 232 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 DCTN2Q13561 401 aaKnown RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 TGFBIQ15582 683 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 SYVN1Q86TM6 617 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 IFNL1Q8IU54 200 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 SYT12Q8IV01 421 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 RBM12BQ8IXT5 1001 aaKnown RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 MUS81Q96NY9 551 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 CCDC28BQ9BUN5 200 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 FAM126AQ9BYI3 521 aaPredicted RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 TBC1D23Q9NUY8 699 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 COMMD8Q9NX08 183 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 SH3GLB1Q9Y371 365 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 RNF11Q9Y3C5 154 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 PRKAB1Q9Y478 270 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 CFAP20Q9Y6A4 193 aaKnown RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 MTMR11A4FU01 709 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 MGAT4DA6NG13 374 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 TPST2O60704 377 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 PRKD3O94806 890 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 B3GALT4O96024 378 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 TFAP2AP05549 437 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 URODP06132 367 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 POLR2IP36954 125 aaKnown RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 WASP42768 502 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 CRATP43155 626 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 RPS9P46781 194 aaKnown RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 ARCN1P48444 511 aaKnown RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 RPIAP49247 311 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 SEPHS1P49903 392 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 MERTKQ12866 999 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 MEP1AQ16819 746 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 RFTN2Q52LD8 501 aaPredicted RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 RETSATQ6NUM9 610 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 AFTPHQ6ULP2 937 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 TRAPPC5Q8IUR0 188 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 PLD3Q8IV08 490 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 PGBD5Q8N414 524 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 DDHD1Q8NEL9 900 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 TRPV1Q8NER1 839 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 DACT3Q96B18 629 aaPredicted RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 IMP4Q96G21 291 aaKnown RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 WRAP53Q9BUR4 548 aaKnown RBP8.12□□□□□ -1.11
HPS4-201ENST00000336873 TPK1Q9H3S4 243 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 CERS4Q9HA82 394 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 PNPLA3Q9NST1 481 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 SMOXQ9NWM0 555 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 CFAP97Q9P2B7 532 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 ASB1Q9Y576 335 aa8.12□□□□□ -1.11
HPS4-201ENST00000336873 SSC5DA1L4H1 1573 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 SMIM31A0A1B0GVY4 71 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 LOC730098B7Z3J9 87 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 ZNF195O14628 629 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 NPHS1O60500 1241 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 PRAMEF12O95522 483 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 CD1DP15813 335 aa8.11□□□□□ -1.11
HPS4-201ENST00000336873 FMO3P31513 532 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms