RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 RMI1Q9H9A7 625 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 ZNF358Q9NW07 568 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 SLC23A2Q9UGH3 650 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 TLK1Q9UKI8 766 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 PCDHGA2Q9Y5H1 932 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 ATXN2Q99700 1313 aaKnown RBP21.14■□□□□ 0.97
TPM1-204ENST00000334895 SPTY2D1-AS1A0A0U1RR47 76 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 TYROBPO43914 113 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 MAGEC1O60732 1142 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 BRAFP15056 766 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 PBLDP30039 288 aaPredicted RBP21.14■□□□□ 0.97
TPM1-204ENST00000334895 FZD2Q14332 565 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 GBX1Q14549 363 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 ALG11Q2TAA5 492 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 ACSBG2Q5FVE4 666 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 UGT3A1Q6NUS8 523 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 OTOAQ7RTW8 1153 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 OXR1Q8N573 874 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 KCTD4Q8WVF5 259 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 ELMO1Q92556 727 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 TSACCQ96A04 125 aaPredicted RBP21.14■□□□□ 0.97
TPM1-204ENST00000334895 APOPT1Q96IL0 206 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 CABS1Q96KC9 395 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 CYP4F12Q9HCS2 524 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 IGSF5Q9NSI5 407 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 MKS1Q9NXB0 559 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 KLHL42Q9P2K6 505 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 ZNHIT2Q9UHR6 403 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 CDYLQ9Y232 598 aa21.14■□□□□ 0.97
TPM1-204ENST00000334895 A0A087X1B8 175 aa21.13■□□□□ 0.97
TPM1-204ENST00000334895 F8W8V4 182 aa21.13■□□□□ 0.97
TPM1-204ENST00000334895 TNFRSF10CO14798 259 aa21.13■□□□□ 0.97
TPM1-204ENST00000334895 EIF2B5Q13144 721 aaKnown RBP21.13■□□□□ 0.97
TPM1-204ENST00000334895 BOP1Q14137 746 aaKnown RBP21.13■□□□□ 0.97
TPM1-204ENST00000334895 MPP2Q14168 576 aa21.13■□□□□ 0.97
TPM1-204ENST00000334895 IQCHQ86VS3 1027 aa21.13■□□□□ 0.97
TPM1-204ENST00000334895 GPR78Q96P69 363 aa21.13■□□□□ 0.97
TPM1-204ENST00000334895 TSSK1BQ9BXA7 367 aa21.13■□□□□ 0.97
TPM1-204ENST00000334895 UNKQ9C0B0 810 aaKnown RBP21.13■□□□□ 0.97
TPM1-204ENST00000334895 C12orf65Q9H3J6 166 aaKnown RBP21.13■□□□□ 0.97
TPM1-204ENST00000334895 SSU72Q9NP77 194 aaKnown RBP21.13■□□□□ 0.97
TPM1-204ENST00000334895 TMEM74BQ9NUR3 256 aa21.13■□□□□ 0.97
TPM1-204ENST00000334895 FAM8A1Q9UBU6 413 aa21.13■□□□□ 0.97
TPM1-204ENST00000334895 KLQ9UEF7 1012 aa21.13■□□□□ 0.97
TPM1-204ENST00000334895 MOSPD1Q9UJG1 213 aa21.13■□□□□ 0.97
TPM1-204ENST00000334895 ANKRD6Q9Y2G4 727 aa21.13■□□□□ 0.97
TPM1-204ENST00000334895 PLEKHM1Q9Y4G2 1056 aa21.13■□□□□ 0.97
TPM1-204ENST00000334895 RALGAPA1Q6GYQ0 2036 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 KNL1Q8NG31 2342 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 SCAMP1O15126 338 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 BCAT2O15382 392 aaPredicted RBP21.12■□□□□ 0.97
TPM1-204ENST00000334895 CCDC166P0CW27 439 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 GNPDA1P46926 289 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 SRP54P61011 504 aaKnown RBP21.12■□□□□ 0.97
TPM1-204ENST00000334895 ARHGAP8P85298 464 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 ZC3H14Q6PJT7 736 aaKnown RBP21.12■□□□□ 0.97
TPM1-204ENST00000334895 FAM83HQ6ZRV2 1179 aaPredicted RBP21.12■□□□□ 0.97
TPM1-204ENST00000334895 CEP68Q76N32 757 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 SPATS2Q86XZ4 545 aaKnown RBP21.12■□□□□ 0.97
TPM1-204ENST00000334895 GALNT13Q8IUC8 556 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 VRK3Q8IV63 474 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 OR2L2Q8NH16 312 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 EEF1AKMT1Q8WVE0 214 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 ALKBH8Q96BT7 664 aaKnown RBP21.12■□□□□ 0.97
TPM1-204ENST00000334895 NXNL1Q96CM4 212 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 CARS2Q9HA77 564 aaKnown RBP21.12■□□□□ 0.97
TPM1-204ENST00000334895 SYTL2Q9HCH5 934 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 KLF15Q9UIH9 416 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 IKZF3Q9UKT9 509 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 ST14Q9Y5Y6 855 aa21.12■□□□□ 0.97
TPM1-204ENST00000334895 TP53BP1Q12888 1972 aaPredicted RBP21.12■□□□□ 0.97
TPM1-204ENST00000334895 SLC5A10A0PJK1 596 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 MGAT4DA6NG13 374 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 TLR4O00206 839 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 COPEO14579 308 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 KMOO15229 486 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 GPC4O75487 556 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 KLHL2O95198 593 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 HPDP32754 393 aaPredicted RBP21.11■□□□□ 0.97
TPM1-204ENST00000334895 CRHR1P34998 444 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 SLC26A3P40879 764 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 PPARDQ03181 441 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 HSPA14Q0VDF9 509 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 OVGP1Q12889 678 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 PTK2BQ14289 1009 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 CSHL1Q14406 222 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 CCDC91Q7Z6B0 441 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 TBC1D1Q86TI0 1168 aaPredicted RBP21.11■□□□□ 0.97
TPM1-204ENST00000334895 LINGO1Q96FE5 620 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 IRF2BPLQ9H1B7 796 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 DNMT3AQ9Y6K1 912 aaPredicted RBP21.11■□□□□ 0.97
TPM1-204ENST00000334895 C17orf113A0A1B0GUU1 675 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 PRR19A6NJB7 356 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 COL6A2P12110 1019 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 ACP5P13686 325 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 PREPP48147 710 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 CSNK1EP49674 416 aaKnown RBP21.11■□□□□ 0.97
TPM1-204ENST00000334895 NFE2L1Q14494 772 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 PLEKHS1Q5SXH7 462 aa21.11■□□□□ 0.97
TPM1-204ENST00000334895 CHST15Q7LFX5 561 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms