RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 GLIS1Q8NBF1 620 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 SGIP1Q9BQI5 828 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 CLPTM1O96005 669 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 KRT8P05787 483 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 FYNP06241 537 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 GKP32189 559 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 ZNF33AQ06730 810 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 MTAPQ13126 283 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 ADRM1Q16186 407 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 VWA5B1Q5TIE3 1220 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 ZNF605Q86T29 641 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 OR2T12Q8NG77 320 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 PNPT1Q8TCS8 783 aaKnown RBP14.82□□□□□ -0.04
C9orf47-201ENST00000334490 PYCR2Q96C36 320 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 C7orf26Q96N11 449 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 SLC2A6Q9UGQ3 507 aa14.82□□□□□ -0.04
C9orf47-201ENST00000334490 PLCH1Q4KWH8 1693 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 CPED1A4D0V7 1026 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 C2orf71A6NGG8 1288 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 HEPACAM2A8MVW5 462 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 B4DGG1 531 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 NBNO60934 754 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 POP7O75817 140 aaKnown RBP14.81□□□□□ -0.04
C9orf47-201ENST00000334490 ITGB1P05556 798 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 CCNYL3P0C7X3 344 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 CTSAP10619 480 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 SMIM11AP58511 58 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 OLIG2Q13516 323 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 RAB33AQ14088 237 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 NRF1Q16656 503 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 AAK1Q2M2I8 961 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 RALGPS1Q5JS13 557 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 LRRC74BQ6ZQY2 392 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 EIF3MQ7L2H7 374 aaKnown RBP14.81□□□□□ -0.04
C9orf47-201ENST00000334490 OR52L1Q8NGH7 329 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 KBTBD7Q8WVZ9 684 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 SMARCD2Q92925 531 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 NMUR2Q9GZQ4 415 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 MAT2BQ9NZL9 334 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 B4GALT6Q9UBX8 382 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 FAM72CH0Y354 149 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 PSMG1O95456 288 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 HLA-DQA2P01906 255 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 AQP1P29972 269 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 POLR2JP52435 117 aaKnown RBP14.81□□□□□ -0.04
C9orf47-201ENST00000334490 WNT7BP56706 349 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 STXBP1P61764 594 aaKnown RBP14.81□□□□□ -0.04
C9orf47-201ENST00000334490 FAM72AQ5TYM5 149 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 FAM72DQ6L9T8 149 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 FAM72BQ86X60 149 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 WDTC1Q8N5D0 677 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 TTC29Q8NA56 475 aaPredicted RBP14.81□□□□□ -0.04
C9orf47-201ENST00000334490 SLCO2A1Q92959 643 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 RBM18Q96H35 190 aaKnown RBP14.81□□□□□ -0.04
C9orf47-201ENST00000334490 KCTD3Q9Y597 815 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 MYL12AP19105 171 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 SLC9A6Q92581 669 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 SLC2A13Q96QE2 648 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 RAB11FIP5Q9BXF6 653 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 GRIP2Q9C0E4 1043 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 EPS8L2Q9H6S3 715 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 LRRC14BA6NHZ5 514 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 SUV39H1O43463 412 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 RPL4P36578 427 aaKnown RBP14.81□□□□□ -0.04
C9orf47-201ENST00000334490 PNLIPRP1P54315 467 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 TNK2Q07912 1038 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 ARMC8Q8IUR7 673 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 ANKLE1Q8NAG6 615 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 MIPEPQ99797 713 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 FNDC11Q9BVV2 318 aa14.81□□□□□ -0.04
C9orf47-201ENST00000334490 MRPS30Q9NP92 439 aaKnown RBP14.81□□□□□ -0.04
C9orf47-201ENST00000334490 DYTNA2CJ06 578 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 NEMP2A6NFY4 417 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 STC2O76061 302 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 ZNF8P17098 575 aaPredicted RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 DEF8Q6ZN54 512 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 RMND5BQ96G75 393 aaPredicted RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 REXO5Q96IC2 774 aaKnown RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 MTERF1Q99551 399 aaKnown RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 CCDC28BQ9BUN5 200 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 HERC2P3Q9BVR0 1158 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 TFB2MQ9H5Q4 396 aaKnown RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 MRTO4Q9UKD2 239 aaKnown RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 TPRKBQ9Y3C4 175 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 Q6ZVL8 140 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 TMEM130Q8N3G9 435 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 FEM1AQ9BSK4 669 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 ADI1Q9BV57 179 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 GTPBP2Q9BX10 602 aaKnown RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 PCDHGB3Q9Y5G1 929 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 BBIP1A8MTZ0 92 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 K7EPI3 171 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 ERN1O75460 977 aaKnown RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 NDUFS1P28331 727 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 STK19P49842 368 aaPredicted RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 LMAN2Q12907 356 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 KCNJ11Q14654 390 aa14.8□□□□□ -0.04
C9orf47-201ENST00000334490 RFTN2Q52LD8 501 aaPredicted RBP14.8□□□□□ -0.04
C9orf47-201ENST00000334490 ZNF781Q8N8C0 355 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms