RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ZNF304Q9HCX3 659 aa5.46□□□□□ -1.53
PTPRB-202ENST00000334414 SLAIN2Q9P270 581 aa5.46□□□□□ -1.53
PTPRB-202ENST00000334414 POMPQ9Y244 141 aa5.46□□□□□ -1.53
PTPRB-202ENST00000334414 WASF2Q9Y6W5 498 aa5.46□□□□□ -1.53
PTPRB-202ENST00000334414 C1orf196B1AJZ1 125 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 CBX4O00257 560 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 SCGB2A1O75556 95 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 RAB36O95755 333 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 ADH6P28332 368 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 ALDH3B2P48448 385 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 CEBPAP49715 358 aaPredicted RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 CYCSP99999 105 aaKnown RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 RPL6Q02878 288 aaKnown RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 VSTM1Q6UX27 236 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 EEPD1Q7L9B9 569 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 ACOT1Q86TX2 421 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 BANPQ8N9N5 519 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 C7orf57Q8NEG2 295 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 OR10H5Q8NGA6 315 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 TAS1R2Q8TE23 839 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 EPS8L1Q8TE68 723 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF641Q96N77 438 aaPredicted RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 BRD9Q9H8M2 597 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 TCF7L1Q9HCS4 588 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 TEX13CA0A0J9YWL9 993 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 PER2O15055 1255 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 DENRO43583 198 aaKnown RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 SNAPINO95295 136 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 ASGR1P07306 291 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 DLSTP36957 453 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 CLK2P49760 499 aaKnown RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 SRSF11Q05519 484 aaKnown RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 USP41Q3LFD5 358 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 FAM198BQ6UWH4 519 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 ARL14Q8N4G2 192 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 OR4L1Q8NH43 312 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 VANGL1Q8TAA9 524 aaPredicted RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 PCDH19Q8TAB3 1148 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 S100A16Q96FQ6 103 aaKnown RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 RNF157Q96PX1 679 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 EXO5Q9H790 373 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 TMEM45AQ9NWC5 275 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 HCN3Q9P1Z3 774 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 USP21Q9UK80 565 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 AP1M2Q9Y6Q5 423 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 C10orf71Q711Q0 1435 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 FAM205CA6NFA0 338 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 IL32P24001 234 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 CCR4P51679 360 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 PRR5P85299 388 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 HMGN3Q15651 99 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 SLC22A10Q63ZE4 541 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 STYK1Q6J9G0 422 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 SPPL2CQ8IUH8 684 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 PDZD9Q8IXQ8 264 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 PRICKLE1Q96MT3 831 aaPredicted RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF334Q9HCZ1 680 aaPredicted RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 NEUROD4Q9HD90 331 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 BIN3Q9NQY0 253 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 ARMC1Q9NVT9 282 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 LYARQ9NX58 379 aaKnown RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 AURKAO14965 403 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 CD36P16671 472 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 EPORP19235 508 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 GADD45AP24522 165 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 HSD17B2P37059 387 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 ADIGQ0VDE8 80 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 SEC23BQ15437 767 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 BTBD16Q32M84 506 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 SYVN1Q86TM6 617 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 DENND1CQ8IV53 801 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 MIOSQ9NXC5 875 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 M0R129 80 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 CACNG1Q06432 222 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 PARP15Q460N3 678 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 LRRC70Q7Z2Q7 622 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 TTLQ8NG68 377 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 OR4C15Q8NGM1 316 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 GPER1Q99527 375 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 TREM1Q9NP99 234 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 OR12D3Q9UGF7 316 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 NDUFB5O43674 189 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 CSF1RP07333 972 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 SULT2A1Q06520 285 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 SREBF2Q12772 1141 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 CCDC58Q4VC31 144 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 GID4Q8IVV7 300 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 ZUFSPQ96AP4 578 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 MOAP1Q96BY2 351 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 SLC41A3Q96GZ6 507 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 INPP4AQ96PE3 977 aaPredicted RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 RBMX2Q9Y388 322 aaKnown RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 PHRF1Q9P1Y6 1649 aaKnown RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 NT5C1B-RDH14C9J2C7 533 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 BTBD19C9JJ37 291 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 SAGP10523 405 aaPredicted RBP5.46□□□□□ -1.54
PTPRB-202ENST00000334414 GNALP38405 381 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 RFX3P48380 749 aa5.46□□□□□ -1.54
PTPRB-202ENST00000334414 CD97P48960 835 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms