RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 ERICH5Q6P6B1 374 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 ARPINQ7Z6K5 226 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 GALNT11Q8NCW6 608 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 TNFAIP8L1Q8WVP5 186 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 MTERF1Q99551 399 aaKnown RBP10.45□□□□□ -0.74
CLN8-201ENST00000331222 GNEQ9Y223 722 aaKnown RBP10.45□□□□□ -0.74
CLN8-201ENST00000331222 NFATC1O95644 943 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 SPAM1P38567 509 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 IDNKQ5T6J7 187 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 NOXRED1Q6NXP6 359 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 NUP54Q7Z3B4 507 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 AMER2Q8N7J2 671 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 KCNU1A8MYU2 1149 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 E7ENQ6 273 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 ECHS1P30084 290 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 DENND5AQ6IQ26 1287 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 GALNT18Q6P9A2 607 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 SLCO6A1Q86UG4 719 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 TBATAQ96M53 351 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 TEFMQ96QE5 360 aaKnown RBP10.45□□□□□ -0.74
CLN8-201ENST00000331222 MNTQ99583 582 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 RBCK1Q9BYM8 510 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 SMG9Q9H0W8 520 aaKnown RBP10.45□□□□□ -0.74
CLN8-201ENST00000331222 VNN3Q9NY84 501 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 NDUFA13Q9P0J0 144 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 CLCA3PQ9Y6N3 262 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 FER1L4A9Z1Z3 1794 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 KIAA1210Q9ULL0 1709 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 CHD4Q14839 1912 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 C5orf51A6NDU8 294 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 OTOL1A6NHN0 477 aaPredicted RBP10.45□□□□□ -0.74
CLN8-201ENST00000331222 MFSD11O43934 449 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 CPNE3O75131 537 aaKnown RBP10.45□□□□□ -0.74
CLN8-201ENST00000331222 MTX2O75431 263 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 CD247P20963 164 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 DCTN2Q13561 401 aaKnown RBP10.45□□□□□ -0.74
CLN8-201ENST00000331222 TNFAIP8L2Q6P589 184 aaPredicted RBP10.45□□□□□ -0.74
CLN8-201ENST00000331222 MREGQ8N565 214 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 CHRAC1Q9NRG0 131 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 ASTN1O14525 1302 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 MEGF6O75095 1541 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 BTBD19C9JJ37 291 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 OR1I1O60431 355 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 MAFO75444 373 aaPredicted RBP10.45□□□□□ -0.74
CLN8-201ENST00000331222 TM7SF2O76062 418 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 TGFB1P01137 390 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 ANXA4P09525 319 aaPredicted RBP10.45□□□□□ -0.74
CLN8-201ENST00000331222 ALADP13716 330 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 OAZ1P54368 228 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 INHBEP58166 350 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 BTN3A2P78410 334 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 BST1Q10588 318 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 TTMPQ5BVD1 217 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 CWF19L1Q69YN2 538 aaKnown RBP10.45□□□□□ -0.74
CLN8-201ENST00000331222 CUZD1Q86UP6 607 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 MPP5Q8N3R9 675 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 OR2L8Q8NGY9 312 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 LNX1Q8TBB1 728 aaPredicted RBP10.45□□□□□ -0.74
CLN8-201ENST00000331222 ZNF285Q96NJ3 590 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 TNFRSF11BO00300 401 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 CPNE6O95741 557 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 IDO1P14902 403 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 CYP3A5P20815 502 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 IGFBP5P24593 272 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 AP1S2P56377 157 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 VBP1P61758 197 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 HSDL1Q3SXM5 330 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 DENND6BQ8NEG7 585 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 PPTC7Q8NI37 304 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 TWIST2Q8WVJ9 160 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 APBB2Q92870 758 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 CIB1Q99828 191 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 TTYH2Q9BSA4 534 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 IRF2BPLQ9H1B7 796 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 SNTG1Q9NSN8 517 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 POLR3BQ9NW08 1133 aaPredicted RBP10.45□□□□□ -0.74
CLN8-201ENST00000331222 GDAP2Q9NXN4 497 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 SPEF1Q9Y4P9 236 aa10.45□□□□□ -0.74
CLN8-201ENST00000331222 SLC15A5A6NIM6 579 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 SLC35G6P0C7Q6 338 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 SELPP16109 830 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 S100A1P23297 94 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 ACVR2AP27037 513 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 NCBP2P52298 156 aaKnown RBP eCLIP10.44□□□□□ -0.743e-7■□□□□ 10.6
CLN8-201ENST00000331222 CAP1Q01518 475 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 CD47Q08722 323 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 TMPRSS11AQ6ZMR5 421 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 AHSA2Q719I0 299 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 LRRC70Q7Z2Q7 622 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 MON1AQ86VX9 555 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 OR5AK3PQ8NH89 298 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 LMX1AQ8TE12 382 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 THAP3Q8WTV1 239 aaPredicted RBP10.44□□□□□ -0.74
CLN8-201ENST00000331222 NCSTNQ92542 709 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 CDH19Q9H159 772 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 B3GALT2O43825 422 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 RPP40O75818 363 aaKnown RBP10.44□□□□□ -0.74
CLN8-201ENST00000331222 CLDN9O95484 217 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 TYRP1P17643 537 aa10.44□□□□□ -0.74
CLN8-201ENST00000331222 GRK6P43250 576 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms