RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 HNRNPRO43390 633 aaKnown RBP14.35□□□□□ -0.11
TPM3-206ENST00000330188 SOCS5O75159 536 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 SLC25A14O95258 325 aaPredicted RBP14.35□□□□□ -0.11
TPM3-206ENST00000330188 CLPTM1O96005 669 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 CNPP09543 421 aaKnown RBP14.35□□□□□ -0.11
TPM3-206ENST00000330188 UGT1A6P19224 532 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 UGT1A1P22309 533 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 UGT1A4P22310 534 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 GABRR2P28476 465 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 UGT1A3P35503 534 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 UGT1A5P35504 534 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 ARL1P40616 181 aaPredicted RBP14.35□□□□□ -0.11
TPM3-206ENST00000330188 RPL5P46777 297 aaKnown RBP14.35□□□□□ -0.11
TPM3-206ENST00000330188 RGS4P49798 205 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 TRAF3Q13114 568 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 PPP4R4Q6NUP7 873 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 ZBTB49Q6ZSB9 765 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 HTR3DQ70Z44 454 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 GAREM2Q75VX8 874 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 CARM1Q86X55 608 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 ZSWIM9Q86XI8 627 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 BBS7Q8IWZ6 715 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 ADGRG5Q8IZF4 528 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 MYO1HQ8N1T3 1032 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 CLDN19Q8N6F1 224 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 ZFAND2BQ8WV99 257 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 FAM126AQ9BYI3 521 aaPredicted RBP14.35□□□□□ -0.11
TPM3-206ENST00000330188 TNKS2Q9H2K2 1166 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 MUC13Q9H3R2 512 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 ALG2Q9H553 416 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 NSUN3Q9H649 340 aaKnown RBP14.35□□□□□ -0.11
TPM3-206ENST00000330188 SPG21Q9NZD8 308 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 SUN2Q9UH99 717 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 AURKCQ9UQB9 309 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 ZFC3H1O60293 1989 aaKnown RBP14.34□□□□□ -0.11
TPM3-206ENST00000330188 GLYATL1P3A0A0U1RQE8 302 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 LSM1O15116 133 aaKnown RBP14.34□□□□□ -0.11
TPM3-206ENST00000330188 OR6B1O95007 311 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 TRIM16O95361 564 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 PSMA4P25789 261 aaKnown RBP14.34□□□□□ -0.11
TPM3-206ENST00000330188 OXTRP30559 389 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 MAPK8P45983 427 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 HSPA7P48741 367 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 EEFSECP57772 596 aaKnown RBP14.34□□□□□ -0.11
TPM3-206ENST00000330188 EMX2Q04743 252 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 LIPEQ05469 1076 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 APOFQ13790 326 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 CHRNA6Q15825 494 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 PTRH1Q86Y79 214 aaKnown RBP14.34□□□□□ -0.11
TPM3-206ENST00000330188 CPXM2Q8N436 756 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 TMEM74Q96NL1 305 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 HBEGFQ99075 208 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 PRPF18Q99633 342 aaKnown RBP14.34□□□□□ -0.11
TPM3-206ENST00000330188 ATP13A3Q9H7F0 1226 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 IPPKQ9H8X2 491 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 INTS7Q9NVH2 962 aaKnown RBP14.34□□□□□ -0.11
TPM3-206ENST00000330188 DUS2Q9NX74 493 aaKnown RBP14.34□□□□□ -0.11
TPM3-206ENST00000330188 NDUFA13Q9P0J0 144 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 CFAP97Q9P2B7 532 aa14.34□□□□□ -0.11
TPM3-206ENST00000330188 INTS6Q9UL03 887 aaKnown RBP14.34□□□□□ -0.11
TPM3-206ENST00000330188 PIKFYVEQ9Y2I7 2098 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 KATNA1O75449 491 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 GUCA1CO95843 209 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 IGSF6O95976 241 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 OTCP00480 354 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 CKMP06732 381 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 MTHFD1P11586 935 aaKnown RBP14.33□□□□□ -0.11
TPM3-206ENST00000330188 LAG3P18627 525 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 IL10P22301 178 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 DGKAP23743 735 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 CD70P32970 193 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 SPAM1P38567 509 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 CASP2P42575 452 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 DEFB103AP81534 67 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 ROR2Q01974 943 aaKnown RBP14.33□□□□□ -0.11
TPM3-206ENST00000330188 PRKG2Q13237 762 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 PLEKHG6Q3KR16 790 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 FUT11Q495W5 492 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 DGKKQ5KSL6 1271 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 GPRC6AQ5T6X5 926 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 LYPLAL1Q5VWZ2 237 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 TPGS1Q6ZTW0 290 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 IFNEQ86WN2 208 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 EPHX4Q8IUS5 362 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 ZBTB2Q8N680 514 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 METTL25Q8N6Q8 603 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 PAF1Q8N7H5 531 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 VOPP1Q96AW1 172 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 KCTD14Q9BQ13 255 aaPredicted RBP14.33□□□□□ -0.11
TPM3-206ENST00000330188 ACTL8Q9H568 366 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 AGPAT4Q9NRZ5 378 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 ABCB8Q9NUT2 735 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 KIAA1522Q9P206 1035 aaPredicted RBP14.33□□□□□ -0.11
TPM3-206ENST00000330188 CRLS1Q9UJA2 301 aa14.33□□□□□ -0.11
TPM3-206ENST00000330188 PLXNB3Q9ULL4 1909 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 TCRBV5S2A0A599 114 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 SAC3D1A6NKF1 404 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 GPIP06744 558 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 SLC7A9P82251 487 aa14.33□□□□□ -0.12
TPM3-206ENST00000330188 ABRAXAS2Q15018 415 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms