RNA–Protein interactions for RNA: ENST00000330149.9

TRAPPC6B-201, Transcript of trafficking protein particle complex 6B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,242 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-201ENST00000330149 FERD3LQ96RJ6 166 aa5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 EBNA1BP2Q99848 306 aaKnown RBP5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 FERMT1Q9BQL6 677 aa5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 EFHD1Q9BUP0 239 aa5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 FRMD8Q9BZ67 464 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 BRINP2Q9C0B6 783 aa5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 ILKAPQ9H0C8 392 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 C2orf40Q9H1Z8 148 aa5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 ARMC7Q9H6L4 198 aa5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 COQ10BQ9H8M1 238 aa5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 EFCAB1Q9HAE3 211 aa5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 CD93Q9NPY3 652 aa5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 TDP1Q9NUW8 608 aa5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 TRNAU1APQ9NX07 287 aaKnown RBP5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 TMEM216Q9P0N5 145 aa5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 SUN2Q9UH99 717 aa5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 COQ6Q9Y2Z9 468 aa5.71□□□□□ -1.5
TRAPPC6B-201ENST00000330149 RGSL1A5PLK6 1076 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 SAC3D1A6NKF1 404 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 TMCC2O75069 709 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 E2F6O75461 281 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 H6PDO95479 791 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 TMEM11P17152 192 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 PRKCHP24723 683 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 PTPN7P35236 360 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 TIE1P35590 1138 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 GRM5P41594 1212 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 GRIA1P42261 906 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 WASP42768 502 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 NAMPTP43490 491 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 POLD2P49005 469 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 EMP3P54852 163 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 CDK18Q07002 472 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 GPR17Q13304 367 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 NOMO1Q15155 1222 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 ANKDD1AQ495B1 522 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 SEL1L3Q68CR1 1132 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 SLFN12LQ6IEE8 588 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 XKR5Q6UX68 686 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 BBS5Q8N3I7 341 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 LSMEM1Q8N8F7 131 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 TXNDC5Q8NBS9 432 aaKnown RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 BEST2Q8NFU1 509 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 GRIN3AQ8TCU5 1115 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 TFAP2BQ92481 460 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 MOCOSQ96EN8 888 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 CGRRF1Q99675 332 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 NPAS2Q99743 824 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 OXCT2Q9BYC2 517 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 SLC38A7Q9NVC3 462 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 COPG2Q9UBF2 871 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 EBF1Q9UH73 591 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 NDOR1Q9UHB4 597 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 PRPF19Q9UMS4 504 aaKnown RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 AURKCQ9UQB9 309 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 AP4S1Q9Y587 144 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 CENPEQ02224 2701 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 AHCTF1Q8WYP5 2266 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 C3orf70A6NLC5 250 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 PSMD12O00232 456 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 TPPPO94811 219 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 FBXO21O94952 628 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 ZBTB11O95625 1053 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 CKMP06732 381 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 F7P08709 466 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 FTH1P19P0C7X4 201 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 ERVK-10P10266 1014 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 APEHP13798 732 aaKnown RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 CCDC130P13994 396 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 ZNF23P17027 643 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 PTPN1P18031 435 aaKnown RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 RPL10P27635 214 aaKnown RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 MAP4P27816 1152 aaKnown RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 ITPKBP27987 946 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 CLDN6P56747 220 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 TUBB3Q13509 450 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 PCLAFQ15004 111 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 TRIP6Q15654 476 aaKnown RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 MTX3Q5HYI7 312 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 GPR107Q5VW38 600 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 IL23RQ5VWK5 629 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 TMEM198Q66K66 360 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 OGFOD2Q6N063 350 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 PIP4P1Q86T03 277 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 CAND1Q86VP6 1230 aaKnown RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 LILRA2Q8N149 483 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 CCNYQ8ND76 341 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 UBA3Q8TBC4 463 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 CYGBQ8WWM9 190 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 LRTOMTQ8WZ04 291 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 IRGQQ8WZA9 623 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 VPS50Q96JG6 964 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 HEXIM2Q96MH2 286 aaKnown RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 CEP41Q9BYV8 373 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 ZNF518BQ9C0D4 1074 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 RBM38Q9H0Z9 239 aaKnown RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 NOL11Q9H8H0 719 aaKnown RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 CLK4Q9HAZ1 481 aaKnown RBP5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 TBCCD1Q9NVR7 557 aa5.7□□□□□ -1.5
TRAPPC6B-201ENST00000330149 DUS2Q9NX74 493 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms