RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 NAT14Q8WUY8 206 aa27.06■■□□□ 1.92
ATPAF1-201ENST00000329231 TAAR9Q96RI9 348 aa27.06■■□□□ 1.92
ATPAF1-201ENST00000329231 VPS37BQ9H9H4 285 aa27.06■■□□□ 1.92
ATPAF1-201ENST00000329231 RIMKLBQ9ULI2 386 aa27.06■■□□□ 1.92
ATPAF1-201ENST00000329231 CHD6Q8TD26 2715 aa27.06■■□□□ 1.92
ATPAF1-201ENST00000329231 A8MU76 341 aa27.05■■□□□ 1.92
ATPAF1-201ENST00000329231 KIF5CO60282 957 aa27.05■■□□□ 1.92
ATPAF1-201ENST00000329231 FGF3P11487 239 aaPredicted RBP27.05■■□□□ 1.92
ATPAF1-201ENST00000329231 ARSDP51689 593 aa27.05■■□□□ 1.92
ATPAF1-201ENST00000329231 BASP1P80723 227 aaKnown RBP27.05■■□□□ 1.92
ATPAF1-201ENST00000329231 NLRP9Q7RTR0 991 aa27.05■■□□□ 1.92
ATPAF1-201ENST00000329231 RASGEF1CQ8N431 466 aa27.05■■□□□ 1.92
ATPAF1-201ENST00000329231 PRELID2Q8N945 189 aa27.05■■□□□ 1.92
ATPAF1-201ENST00000329231 HM13Q8TCT9 377 aa27.05■■□□□ 1.92
ATPAF1-201ENST00000329231 PRORYQ9H606 182 aa27.05■■□□□ 1.92
ATPAF1-201ENST00000329231 OGFRQ9NZT2 677 aa27.05■■□□□ 1.92
ATPAF1-201ENST00000329231 FAM8A1Q9UBU6 413 aa27.05■■□□□ 1.92
ATPAF1-201ENST00000329231 MN1Q10571 1320 aaPredicted RBP27.05■■□□□ 1.92
ATPAF1-201ENST00000329231 C17orf113A0A1B0GUU1 675 aa27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 C9orf172C9J069 976 aa27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 TYRP1P17643 537 aa27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 CD82P27701 267 aa27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 TMPRSS3P57727 454 aa27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 CLN3Q13286 438 aa27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 TSTD2Q5T7W7 516 aa27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 FAM129CQ86XR2 697 aa27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 PIANPQ8IYJ0 282 aa27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 CFAP206Q8IYR0 622 aa27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 NAP1L3Q99457 506 aaPredicted RBP27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 WWP1Q9H0M0 922 aa27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 KLHL3Q9UH77 587 aa27.04■■□□□ 1.92
ATPAF1-201ENST00000329231 BPTFQ12830 3046 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 EFCAB7A8K855 629 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 B4E171 279 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 AP3B1O00203 1094 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 SLC35G4P0C7Q5 338 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 PRSS56P0CW18 603 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 MTHFD1P11586 935 aaKnown RBP27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 TSPAN7P41732 249 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 DBN1Q16643 649 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 SLC35F6Q8N357 371 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 OR13J1Q8NGT2 312 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 FCRL3Q96P31 734 aaPredicted RBP27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 CCM2Q9BSQ5 444 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 IMP3Q9NV31 184 aaKnown RBP27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 SLC39A1Q9NY26 324 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 FOXJ2Q9P0K8 574 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 TTC7AQ9ULT0 858 aaPredicted RBP27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 PYCARDQ9ULZ3 195 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 SSUH2Q9Y2M2 353 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 TCAF1Q9Y4C2 921 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 PCDHGA3Q9Y5H0 932 aa27.03■■□□□ 1.92
ATPAF1-201ENST00000329231 CCDC162PA2VCL2 907 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 AP2A2O94973 939 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 C9P02748 559 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 POLBP06746 335 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 FOXN2P32314 431 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 CAPZBP47756 277 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 CXADRP78310 365 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 ITIH4Q14624 930 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 AFTPHQ6ULP2 937 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 MICALCLQ6ZW33 695 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 PPHLN1Q8NEY8 458 aaKnown RBP27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 GPR150Q8NGU9 434 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 PEX13Q92968 403 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 ART4Q93070 314 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 HDAC10Q969S8 669 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 C12orf66Q96MD2 445 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 INSM2Q96T92 566 aaPredicted RBP27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 TTC1Q99614 292 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 DDA1Q9BW61 102 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 OCIAD1Q9NX40 245 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 SMARCAL1Q9NZC9 954 aa27.02■■□□□ 1.92
ATPAF1-201ENST00000329231 OR51F1A6NGY5 319 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 USP27XA6NNY8 438 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 GSTM1P09488 218 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 ANKRD34CP0C6C1 535 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 LIPCP11150 499 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 NSG1P42857 185 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 GFERP55789 205 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 RAB15P59190 212 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 CDK16Q00536 496 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 GSTM4Q03013 218 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 ACVR1Q04771 509 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 LYPLAL1Q5VWZ2 237 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 KLHL35Q6PF15 583 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 ZFPM2Q8WW38 1151 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 MS4A14Q96JA4 679 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 C9orf72Q96LT7 481 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 TGM7Q96PF1 710 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 ASPSCR1Q9BZE9 553 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 SLC2A6Q9UGQ3 507 aa27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 CFAP20Q9Y6A4 193 aaKnown RBP27.01■■□□□ 1.91
ATPAF1-201ENST00000329231 PTPRQQ9UMZ3 2332 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 QSOX1O00391 747 aa27■■□□□ 1.91
ATPAF1-201ENST00000329231 TOX3O15405 576 aaPredicted RBP27■■□□□ 1.91
ATPAF1-201ENST00000329231 CAPN5O15484 640 aaPredicted RBP27■■□□□ 1.91
ATPAF1-201ENST00000329231 SESN2P58004 480 aaPredicted RBP27■■□□□ 1.91
ATPAF1-201ENST00000329231 PLCL1Q15111 1095 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms