RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 MBD1Q9UIS9 605 aaPredicted RBP14.7□□□□□ -0.06
TPM3-205ENST00000328159 PTBP2Q9UKA9 531 aaKnown RBP14.7□□□□□ -0.06
TPM3-205ENST00000328159 PPM1HQ9ULR3 514 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 ITM2BQ9Y287 266 aa14.7□□□□□ -0.06
TPM3-205ENST00000328159 LRRK1Q38SD2 2015 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 TBC1D3BA6NDS4 549 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 FADS2P1A8MWK0 482 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 PSMD11O00231 422 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 TAPBPO15533 448 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 SPINT1O43278 529 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 VCLP18206 1134 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 PRDX3P30048 256 aaKnown RBP14.69□□□□□ -0.06
TPM3-205ENST00000328159 GJA4P35212 333 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 ATP4BP51164 291 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 METAP1P53582 386 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 PKNOX1P55347 436 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 GBX1Q14549 363 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 ELAVL3Q14576 367 aaKnown RBP14.69□□□□□ -0.06
TPM3-205ENST00000328159 ZRSR2Q15696 482 aaKnown RBP14.69□□□□□ -0.06
TPM3-205ENST00000328159 ATAT1Q5SQI0 421 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 SERPINA13PQ6UXR4 307 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 NET1Q7Z628 596 aaPredicted RBP14.69□□□□□ -0.06
TPM3-205ENST00000328159 NRSN1Q8IZ57 195 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 DEFB107AQ8IZN7 70 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 DDHD1Q8NEL9 900 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 WDR60Q8WVS4 1066 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 DLG3Q92796 817 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 FAM129BQ96TA1 746 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 KXD1Q9BQD3 176 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 AKTIPQ9H8T0 292 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 RDH14Q9HBH5 336 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 SUN2Q9UH99 717 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 SLC7A8Q9UHI5 535 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 ZNF225Q9UK10 706 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 BTRCQ9Y297 605 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 PTGDR2Q9Y5Y4 395 aa14.69□□□□□ -0.06
TPM3-205ENST00000328159 AIM2O14862 343 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 GIPC1O14908 333 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 MTX2O75431 263 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 AP2A2O94973 939 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 GUCA1CO95843 209 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 UROSP10746 265 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 MSH3P20585 1137 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 GTF2H2Q13888 395 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 KHDC1Q4VXA5 237 aaKnown RBP14.68□□□□□ -0.06
TPM3-205ENST00000328159 SULT1C3Q6IMI6 304 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 GTF2H2CQ6P1K8 395 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 GOLGA7Q7Z5G4 137 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 KYQ8NBH2 561 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 HMGCLL1Q8TB92 370 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 SUSD6Q92537 303 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 RCN3Q96D15 328 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 VPS35Q96QK1 796 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 EGFL8Q99944 293 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 WRAP53Q9BUR4 548 aaKnown RBP14.68□□□□□ -0.06
TPM3-205ENST00000328159 NOL11Q9H8H0 719 aaKnown RBP14.68□□□□□ -0.06
TPM3-205ENST00000328159 RNPEPL1Q9HAU8 725 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 TIMM22Q9Y584 194 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 PSMD12O00232 456 aaPredicted RBP14.68□□□□□ -0.06
TPM3-205ENST00000328159 WNT9AO14904 365 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 NUAK1O60285 661 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 VPS4BO75351 444 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 OR4F21O95013 312 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 CHEK2O96017 543 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 LMNAP02545 664 aaKnown RBP14.68□□□□□ -0.06
TPM3-205ENST00000328159 LINC00032P0C843 101 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 MPC1LP0DKB6 136 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 PSMC3P17980 439 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 HSPA7P48741 367 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 NUDT2P50583 147 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 ELP6Q0PNE2 266 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 PTK2BQ14289 1009 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 FASTKQ14296 549 aaKnown RBP14.68□□□□□ -0.06
TPM3-205ENST00000328159 MAPRE2Q15555 327 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 LDLRAP1Q5SW96 308 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 PLEKHS1Q5SXH7 462 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 C6orf163Q5TEZ5 329 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 PGM2L1Q6PCE3 622 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 FBXL19Q6PCT2 694 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 GK5Q6ZS86 529 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 UBTD2Q8WUN7 234 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 BTN2A2Q8WVV5 523 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 ELSPBP1Q96BH3 223 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 AP2M1Q96CW1 435 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 PPP1R16AQ96I34 528 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 COQ10AQ96MF6 247 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 FBRSL1Q9HCM7 1045 aaKnown RBP14.68□□□□□ -0.06
TPM3-205ENST00000328159 WWOXQ9NZC7 414 aa14.68□□□□□ -0.06
TPM3-205ENST00000328159 THAP10Q9P2Z0 257 aaPredicted RBP14.68□□□□□ -0.06
TPM3-205ENST00000328159 DENND4AQ7Z401 1863 aa14.67□□□□□ -0.06
TPM3-205ENST00000328159 H0Y858 1186 aa14.67□□□□□ -0.06
TPM3-205ENST00000328159 KPNA5O15131 536 aa14.67□□□□□ -0.06
TPM3-205ENST00000328159 SGTAO43765 313 aa14.67□□□□□ -0.06
TPM3-205ENST00000328159 KAT7O95251 611 aa14.67□□□□□ -0.06
TPM3-205ENST00000328159 IL12RB1P42701 662 aa14.67□□□□□ -0.06
TPM3-205ENST00000328159 ERVPABLB-1P60509 514 aa14.67□□□□□ -0.06
TPM3-205ENST00000328159 HSPA14Q0VDF9 509 aa14.67□□□□□ -0.06
TPM3-205ENST00000328159 TBL3Q12788 808 aaKnown RBP14.67□□□□□ -0.06
TPM3-205ENST00000328159 ADAM15Q13444 863 aa14.67□□□□□ -0.06
TPM3-205ENST00000328159 BOP1Q14137 746 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms