RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 BPIFB1Q8TDL5 484 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 CD300LFQ8TDQ1 290 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 RASSF5Q8WWW0 418 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 KCNQ5Q9NR82 932 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 FAM105AQ9NUU6 356 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.83□□□□□ -1.16
CIITA-201ENST00000324288 RAP2CQ9Y3L5 183 aa7.83□□□□□ -1.16
CIITA-201ENST00000324288 PLA2R1Q13018 1463 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 FAM86C2PA6NEL3 165 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 NT5C1B-RDH14C9J2C7 533 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 MTPNP58546 118 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 S100A10P60903 97 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 HAGHLQ6PII5 290 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 LDB1Q86U70 411 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 GALNT12Q8IXK2 581 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 MAB21L3Q8N8X9 362 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 GRPEL2Q8TAA5 225 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ZNF431Q8TF32 576 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 FUZQ9BT04 418 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 SNRNP25Q9BV90 132 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 SIRPGQ9P1W8 387 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 MED13LQ71F56 2210 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 CCL16O15467 120 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 SLITRK3O94933 977 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 CCNB2O95067 398 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 IFNGP01579 166 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 CD36P16671 472 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 SHMT1P34896 483 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 CCR10P46092 362 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 TARBP2Q15633 366 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 PDCD4Q53EL6 469 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 SNX20Q7Z614 316 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 C4orf19Q8IY42 314 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 DQX1Q8TE96 717 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 MSANTD3Q96H12 275 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 MND1Q9BWT6 205 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 RDH8Q9NYR8 311 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ISPDA4D126 451 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 FGF10O15520 208 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 DHX15O43143 795 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 TSPAN5P62079 268 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 KLHL26Q53HC5 615 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 LRRC73Q5JTD7 316 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 CES5AQ6NT32 575 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 CYP4V2Q6ZWL3 525 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 HM13Q8TCT9 377 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ABCC13Q9NSE7 274 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 CORO2BQ9UQ03 480 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 SIGLEC16A6NMB1 481 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 XKRYO14609 159 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 STBD1O95210 358 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ZNF14P17017 642 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 POLR2JP52435 117 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 RABGGTBP53611 331 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 BNIP1Q12981 228 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 PLEKHG4Q58EX7 1191 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 AADACL4Q5VUY2 407 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ZNF782Q6ZMW2 699 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 SMPDL3BQ92485 455 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 TMEM203Q969S6 136 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ASB2Q96Q27 587 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 BOLA2-SMG1P6H3BVE0 249 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 RNF225M0QZC1 329 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 ENPP3O14638 875 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 PTPRAP18433 802 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 TGFB2P61812 414 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 DGKZQ13574 1117 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 CDKL4Q5MAI5 379 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ADNP2Q6IQ32 1131 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 NKAPQ8N5F7 415 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 CPSF7Q8N684 471 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 EPS8L1Q8TE68 723 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 HBEGFQ99075 208 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 SPATA5L1Q9BVQ7 753 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 PCDHAC1Q9H158 963 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 AGO1Q9UL18 857 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 MGAT4AQ9UM21 535 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ARL5CA6NH57 179 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 VNN2O95498 520 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 IFNA7P01567 189 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 SRCP12931 536 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 NKX2-5P52952 324 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 PON2Q15165 354 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 PSRC1Q6PGN9 363 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 SNX33Q8WV41 574 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 TEFMQ96QE5 360 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 MOV10Q9HCE1 1003 aaKnown RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 PCDHB9Q9Y5E1 797 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 BTBD19C9JJ37 291 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 H0YJX3 145 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 STATHP02808 62 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 HTR1BP28222 390 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 MASP1P48740 699 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 ZNF135P52742 658 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 DDR1Q08345 913 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 GET4Q7L5D6 327 aaPredicted RBP7.82□□□□□ -1.16
CIITA-201ENST00000324288 DEFB132Q7Z7B7 95 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 P2RY8Q86VZ1 359 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 CD101Q93033 1021 aa7.82□□□□□ -1.16
CIITA-201ENST00000324288 RIPOR3Q96MK2 946 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms