RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 FAM234BA2RU67 622 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 MAGEB17A8MXT2 336 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 LGR5O75473 907 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 PRPS2P11908 318 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 IRAK1BP1Q5VVH5 260 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 FAM171BQ6P995 826 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 TMPRSS11AQ6ZMR5 421 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 BEND5Q7L4P6 421 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 OAFQ86UD1 273 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 BEND7Q8N7W2 519 aaPredicted RBP10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 BCO2Q9BYV7 579 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 NMUR1Q9HB89 426 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 INTS7Q9NVH2 962 aaKnown RBP10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 STON1Q9Y6Q2 735 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 ANGPTL1O95841 491 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 APODP05090 189 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 IMPDH1P20839 514 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 WDR4P57081 412 aaKnown RBP10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 RFTN1Q14699 578 aaPredicted RBP10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 PIK3R6Q5UE93 754 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 FAM124AQ86V42 546 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 ADGRG2Q8IZP9 1017 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 COX4I2Q96KJ9 171 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 ATG10Q9H0Y0 220 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 CXorf49A8MYA2 514 aaPredicted RBP10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 OR5F1O95221 314 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 EOMESO95936 686 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 ASLP04424 464 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 SDC2P34741 201 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 SCNN1AP37088 669 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 JAZF1Q86VZ6 243 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 CPNE9Q8IYJ1 553 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 FAM156AQ8NDB6 213 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 OR10A6Q8NH74 314 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 CCDC177Q9NQR7 707 aaPredicted RBP10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 COMMD9Q9P000 198 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 CIDEBQ9UHD4 219 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 BAZ2BQ9UIF8 2168 aaKnown RBP10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 OR2AG2A6NM03 316 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 HLA-DQB2P05538 268 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 SLC18A1P54219 525 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 IL18R1Q13478 541 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 DCST1Q5T197 706 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 RBM23Q86U06 439 aaKnown RBP10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 DCBLD1Q8N8Z6 715 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 RNASE11Q8TAA1 199 aaKnown RBP10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 ADAMTS15Q8TE58 950 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 PDCD10Q9BUL8 212 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 POLE3Q9NRF9 147 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 MT-ND1P03886 318 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 HKDC1Q2TB90 917 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 SLC51AQ86UW1 340 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 KCTD13Q8WZ19 329 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 MYOCQ99972 504 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 OSER1Q9NX31 292 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 POP4O95707 220 aaKnown RBP10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 IFNW1P05000 195 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 GPX6P59796 221 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 IL18Q14116 193 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 SNAPC1Q16533 368 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 RPTNQ6XPR3 784 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 TTC29Q8NA56 475 aaPredicted RBP10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 MFSD1Q9H3U5 465 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 NR2E3Q9Y5X4 410 aa10.78□□□□□ -0.68
SNRNP200-201ENST00000323853 RGPD8O14715 1765 aaPredicted RBP10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 KDM4FA0A1W2PPD8 638 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 FAM86C2PA6NEL3 165 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 hCG_2039718K7EN88 272 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 PRNPP04156 253 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 RAP2AP10114 183 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 CYP4F8P98187 520 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 CHIT1Q13231 466 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 DNAJB8Q8NHS0 232 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 EXOSC8Q96B26 276 aaKnown RBP10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 FAM83DQ9H4H8 585 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 PHPT1Q9NRX4 125 aaPredicted RBP10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 C1orf109Q9NX04 203 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 ING3Q9NXR8 418 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 IQCF5A8MTL0 148 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 PLOD3O60568 738 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 HCAR3P49019 387 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 CCT3P49368 545 aaKnown RBP10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 PITRM1Q5JRX3 1037 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 SLC39A4Q6P5W5 647 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 RGL4Q8IZJ4 473 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 OR5K1Q8NHB7 308 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 TMEM138Q9NPI0 162 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 DHRS7Q9Y394 339 aa10.77□□□□□ -0.68
SNRNP200-201ENST00000323853 NUP188Q5SRE5 1749 aa10.77□□□□□ -0.69
SNRNP200-201ENST00000323853 SF1Q15637 639 aaKnown RBP10.77□□□□□ -0.69
SNRNP200-201ENST00000323853 SYPL2Q5VXT5 272 aa10.77□□□□□ -0.69
SNRNP200-201ENST00000323853 CFAP206Q8IYR0 622 aa10.77□□□□□ -0.69
SNRNP200-201ENST00000323853 OR52J3Q8NH60 311 aa10.77□□□□□ -0.69
SNRNP200-201ENST00000323853 WRAP53Q9BUR4 548 aaKnown RBP10.77□□□□□ -0.69
SNRNP200-201ENST00000323853 COQ6Q9Y2Z9 468 aa10.77□□□□□ -0.69
SNRNP200-201ENST00000323853 ADAMDEC1O15204 470 aa10.77□□□□□ -0.69
SNRNP200-201ENST00000323853 AP2A2O94973 939 aa10.77□□□□□ -0.69
SNRNP200-201ENST00000323853 HNMTP50135 292 aa10.77□□□□□ -0.69
SNRNP200-201ENST00000323853 ACSBG2Q5FVE4 666 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms