RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 KCNE2Q9Y6J6 123 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 A0A1W2PP18 115 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 BDNFP23560 247 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 ICAM3P32942 547 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 SMARCB1Q12824 385 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 IL18Q14116 193 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 USP41Q3LFD5 358 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 NOL9Q5SY16 702 aaKnown RBP16.42■□□□□ 0.22
PACS1-201ENST00000320580 BTBD8Q5XKL5 378 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 XRRA1Q6P2D8 792 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 OR52E6Q96RD3 313 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 DHFRP00374 187 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 PGRP06401 933 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 DIO3P55073 304 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 PURAQ00577 322 aaKnown RBP16.42■□□□□ 0.22
PACS1-201ENST00000320580 CAPSQ13938 189 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 FAM187BQ17R55 369 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 TICAM1Q8IUC6 712 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 ZDHHC15Q96MV8 337 aa16.42■□□□□ 0.22
PACS1-201ENST00000320580 PRAMEF33A0A0G2JMD5 474 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 AGAP5A6NIR3 686 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 PRAMEF10O60809 474 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 MYL3P08590 195 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 PTPN3P26045 913 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 GABARAPL2P60520 117 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 LGALS3BPQ08380 585 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 DDX39BQ13838 428 aaKnown RBP16.41■□□□□ 0.22
PACS1-201ENST00000320580 BICRALQ6AI39 1079 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 SH2D5Q6ZV89 423 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 FAM83FQ8NEG4 500 aaPredicted RBP16.41■□□□□ 0.22
PACS1-201ENST00000320580 CLHC1Q8NHS4 586 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 MYLPFQ96A32 169 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 ABCG8Q9H221 673 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 CMTM6Q9NX76 183 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 LAMB4A4D0S4 1761 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 B8ZZF3 427 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 CCL22O00626 93 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 SLC1A2P43004 574 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 KRT74Q7RTS7 529 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 OLIG1Q8TAK6 271 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 GTF2H4Q92759 462 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 NTPCRQ9BSD7 190 aaKnown RBP16.41■□□□□ 0.22
PACS1-201ENST00000320580 CLN6Q9NWW5 311 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 HMGXB4Q9UGU5 601 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 LCKP06239 509 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 TKTL1P51854 596 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 C1QTNF8P60827 252 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 UFM1P61960 85 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 ACAP2Q15057 778 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 Q96MT0 163 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 MYOZ2Q9NPC6 264 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 MRPL39Q9NYK5 338 aaKnown RBP16.41■□□□□ 0.22
PACS1-201ENST00000320580 GSTK1Q9Y2Q3 226 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 PCDHGA11Q9Y5H2 935 aa16.41■□□□□ 0.22
PACS1-201ENST00000320580 DNTTP04053 509 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 HSD17B1P14061 328 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 OR3A3P47888 321 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 OR4D2P58180 307 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 EMX1Q04741 257 aaPredicted RBP16.4■□□□□ 0.22
PACS1-201ENST00000320580 CDK10Q15131 360 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 FAM209AQ5JX71 171 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 PTRHD1Q6GMV3 140 aaKnown RBP16.4■□□□□ 0.22
PACS1-201ENST00000320580 HS3ST5Q8IZT8 346 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 UXS1Q8NBZ7 420 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 SPATA33Q96N06 139 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 RDH12Q96NR8 316 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 SLC30A3Q99726 388 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 PTGDR2Q9Y5Y4 395 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 HMX2A2RU54 273 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 CILPO75339 1184 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 SCELO95171 688 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 C9P02748 559 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 ITGB1P05556 798 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 DGKQP52824 942 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 RHAGQ02094 409 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 CAMK2BQ13554 666 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 CYS1Q717R9 158 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 GPSM1Q86YR5 675 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 TMEM199Q8N511 208 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 LSM14AQ8ND56 463 aaKnown RBP16.4■□□□□ 0.22
PACS1-201ENST00000320580 ESAMQ96AP7 390 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 PSD2Q9BQI7 771 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 AASSQ9UDR5 926 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 RPS6KA6Q9UK32 745 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 TMCC3Q9ULS5 477 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 MT-CYBP00156 380 aaPredicted RBP16.4■□□□□ 0.22
PACS1-201ENST00000320580 ARSAP15289 507 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 TRIM71Q2Q1W2 868 aaKnown RBP16.4■□□□□ 0.22
PACS1-201ENST00000320580 TFAP2DQ7Z6R9 452 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 SYVN1Q86TM6 617 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 TIAM2Q8IVF5 1701 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 SIMC1Q8NDZ2 872 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 VPS37AQ8NEZ2 397 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 NDRG1Q92597 394 aaKnown RBP16.4■□□□□ 0.22
PACS1-201ENST00000320580 WNT8BQ93098 351 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 TWNKQ96RR1 684 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 MMP28Q9H239 520 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 ZBTB20Q9HC78 741 aaPredicted RBP16.4■□□□□ 0.22
PACS1-201ENST00000320580 RNF19AQ9NV58 838 aa16.4■□□□□ 0.22
PACS1-201ENST00000320580 MRPS7Q9Y2R9 242 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms