RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ITGB4P16144 1822 aa13.33□□□□□ -0.28
RFFL-201ENST00000315249 RGSL1A5PLK6 1076 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 MPSTP25325 297 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 NRLP54845 237 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 INO80DQ53TQ3 878 aaPredicted RBP13.32□□□□□ -0.28
RFFL-201ENST00000315249 LPCAT2Q7L5N7 544 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 CACTIN-AS1Q8N1I8 211 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 MAGEE2Q8TD90 523 aaPredicted RBP13.32□□□□□ -0.28
RFFL-201ENST00000315249 SERHL2Q9H4I8 314 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 SERHLQ9NQF3 203 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 NUDT4Q9NZJ9 180 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 FLRT1Q9NZU1 646 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 MAN2B1O00754 1011 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 LAMP2P13473 410 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 H2AFXP16104 143 aaPredicted RBP13.32□□□□□ -0.28
RFFL-201ENST00000315249 TPP2P29144 1249 aaPredicted RBP13.32□□□□□ -0.28
RFFL-201ENST00000315249 SMIM11AP58511 58 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 LARS2Q15031 903 aaKnown RBP13.32□□□□□ -0.28
RFFL-201ENST00000315249 NPY5RQ15761 445 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 DPYSL2Q16555 572 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 ZCWPW2Q504Y3 356 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 ASMTP46597 345 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 CCR8P51685 355 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 ARHGAP40Q5TG30 622 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 HGSNATQ68CP4 663 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 ZSCAN1Q8NBB4 408 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 RNF31Q96EP0 1072 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 LRRC37A3O60309 1634 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 CLOCKO15516 846 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 TGM5O43548 720 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 PLGP00747 810 aaPredicted RBP13.32□□□□□ -0.28
RFFL-201ENST00000315249 ESR1P03372 595 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 GNAZP19086 355 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 CCKBRP32239 447 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 CCNFP41002 786 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 ANKRD22Q5VYY1 191 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 LRRC66Q68CR7 880 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 CYB5D1Q6P9G0 228 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 ZNF852Q6ZMS4 543 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 OR10H5Q8NGA6 315 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 ZNF671Q8TAW3 534 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 HCAR2Q8TDS4 363 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 PYCR2Q96C36 320 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 STRADBQ9C0K7 418 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 SDCBP2Q9H190 292 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 SPAG4Q9NPE6 437 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 ZNF37AP17032 561 aaPredicted RBP13.32□□□□□ -0.28
RFFL-201ENST00000315249 SGCBQ16585 318 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 PUS10Q3MIT2 529 aaKnown RBP13.32□□□□□ -0.28
RFFL-201ENST00000315249 TCEAL5Q5H9L2 206 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 C22orf39Q6P5X5 142 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 RTL4Q6ZR62 310 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 NEK7Q8TDX7 302 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 CRTAC1Q9NQ79 661 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 TOR4AQ9NXH8 423 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 A0A0D9SEW6 157 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 H3BQF6 201 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 POP7O75817 140 aaKnown RBP13.32□□□□□ -0.28
RFFL-201ENST00000315249 UNGP13051 313 aaPredicted RBP13.32□□□□□ -0.28
RFFL-201ENST00000315249 PDK4Q16654 411 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 ZIK1Q3SY52 487 aaPredicted RBP13.32□□□□□ -0.28
RFFL-201ENST00000315249 IZUMO2Q6UXV1 221 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 RPTNQ6XPR3 784 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 ARCQ7LC44 396 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 TEX47Q8TBZ9 253 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 PGM2Q96G03 612 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 LDAHQ9H6V9 325 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 ZDHHC3Q9NYG2 299 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 SQORQ9Y6N5 450 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 TAF1P21675 1872 aa13.32□□□□□ -0.28
RFFL-201ENST00000315249 TRIM43BA6NCK2 446 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 GIMD1P0DJR0 217 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 PRR5P85299 388 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 SLC25A3Q00325 362 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 ABHD13Q7L211 337 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 MTRRQ9UBK8 725 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 ADAM30Q9UKF2 790 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 OGDHLQ9ULD0 1010 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 CDC14AQ9UNH5 594 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 NDUFS4O43181 175 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 ENPEPQ07075 957 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 TIGD2Q4W5G0 525 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 PITRM1Q5JRX3 1037 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 ZNF730Q6ZMV8 503 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 OR5M3Q8NGP4 307 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 TWIST2Q8WVJ9 160 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 PYDC1Q8WXC3 89 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 SMARCD2Q92925 531 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 C9orf16Q9BUW7 83 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 TPSD1Q9BZJ3 242 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 PLAGL1Q9UM63 463 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 SAMHD1Q9Y3Z3 626 aaKnown RBP13.31□□□□□ -0.28
RFFL-201ENST00000315249 TP73O15350 636 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 HEPACAMQ14CZ8 416 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 TXNDC5Q8NBS9 432 aaKnown RBP13.31□□□□□ -0.28
RFFL-201ENST00000315249 SMG8Q8ND04 991 aaKnown RBP13.31□□□□□ -0.28
RFFL-201ENST00000315249 RAB11FIP5Q9BXF6 653 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 EPS8L2Q9H6S3 715 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 SLC17A7Q9P2U7 560 aa13.31□□□□□ -0.28
RFFL-201ENST00000315249 CD207Q9UJ71 328 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms