RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 DLG3Q92796 817 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 LRMDAQ9H2I8 198 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 SOHLH2Q9NX45 425 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 IMPAD1Q9NX62 359 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 ZDHHC7Q9NXF8 308 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 PRPF19Q9UMS4 504 aaKnown RBP13.49□□□□□ -0.25
DDX54-202ENST00000314045 C9JVG2 144 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 RFXANKO14593 260 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 FPGTO14772 594 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 ERAL1O75616 437 aaKnown RBP13.49□□□□□ -0.25
DDX54-202ENST00000314045 BMP10O95393 424 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 TRBC1P01850 177 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 ATP1B2P14415 290 aaPredicted RBP13.49□□□□□ -0.25
DDX54-202ENST00000314045 NTSP30990 170 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 MSX2P35548 267 aaPredicted RBP13.49□□□□□ -0.25
DDX54-202ENST00000314045 RAD23AP54725 363 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 TAZQ16635 292 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 ZNF776Q68DI1 518 aaPredicted RBP13.49□□□□□ -0.25
DDX54-202ENST00000314045 NET1Q7Z628 596 aaPredicted RBP13.49□□□□□ -0.25
DDX54-202ENST00000314045 TPD52L3Q96J77 140 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 TXLNGYQ9BZA5 131 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 TRIT1Q9H3H1 467 aaKnown RBP13.49□□□□□ -0.25
DDX54-202ENST00000314045 ZDHHC4Q9NPG8 344 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 DLGAP2Q9P1A6 1054 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 GALPQ9UBC7 116 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 ACTL7AQ9Y615 435 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 GNAZP19086 355 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 SLC6A4P31645 630 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 SLC26A3P40879 764 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 LRRC74BQ6ZQY2 392 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 STK32CQ86UX6 486 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 CPSF7Q8N684 471 aaKnown RBP13.49□□□□□ -0.25
DDX54-202ENST00000314045 OR9Q1Q8NGQ5 310 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 FBXO30Q8TB52 745 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 AGAP11Q8TF27 550 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 GDPD5Q8WTR4 605 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 TRMT2BQ96GJ1 504 aaKnown RBP13.49□□□□□ -0.25
DDX54-202ENST00000314045 SLC39A13Q96H72 371 aa13.49□□□□□ -0.25
DDX54-202ENST00000314045 DRGXA6NNA5 263 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 GRXCR1A8MXD5 290 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 AGRPO00253 132 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 TULP3O75386 442 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 CRATP43155 626 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 SSR2P43308 183 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 NRG1Q02297 640 aaPredicted RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 ZNF805Q5CZA5 627 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 STEAP4Q687X5 459 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 C10orf82Q8WW14 230 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 KLHL28Q9NXS3 571 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 NRXN2Q9P2S2 1712 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 POP7O75817 140 aaKnown RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 KRT36O76013 467 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 RECQL5O94762 991 aaPredicted RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 ATP6V1B1P15313 513 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 PSMC3P17980 439 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 TRIM71Q2Q1W2 868 aaKnown RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 LACTB2Q53H82 288 aaPredicted RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 CAPRIN2Q6IMN6 1127 aaKnown RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 DHDDSQ86SQ9 333 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 ZNF786Q8N393 782 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 KCNJ9Q92806 393 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 YIPF3Q9GZM5 350 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 MCOLN1Q9GZU1 580 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 RAD21L1Q9H4I0 556 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 ADPRHL2Q9NX46 363 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 MARCH4Q9P2E8 410 aaPredicted RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 ANAPC2Q9UJX6 822 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 AP4S1Q9Y587 144 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 HCFC2Q9Y5Z7 792 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 WASH4PA8MWX3 477 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 HHLA1C9JL84 531 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 TNFRSF10BO14763 440 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 KLF11O14901 512 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 HPGDP15428 266 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 MRPS35P82673 323 aaKnown RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 EIF4HQ15056 248 aaKnown RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 ZNF549Q6P9A3 640 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 CDHR3Q6ZTQ4 885 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 TAF8Q7Z7C8 310 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 PATL1Q86TB9 770 aaKnown RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 NT5C3BQ969T7 300 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 TCEAL4Q96EI5 215 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 PPM1MQ96MI6 270 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 PRICKLE1Q96MT3 831 aaPredicted RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 TSC22D3Q99576 134 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 HSFX1Q9UBD0 423 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 PI15O43692 258 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 KAT7O95251 611 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 ACP5P13686 325 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 EPORP19235 508 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 POU1F1P28069 291 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 RRM2P31350 389 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 MAP1BP46821 2468 aaKnown RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 LEPRP48357 1165 aaKnown RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 C1QTNF8P60827 252 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 NFATC2Q13469 925 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 VPS26BQ4G0F5 336 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 R3HCC1LQ7Z5L2 792 aaKnown RBP13.48□□□□□ -0.25
DDX54-202ENST00000314045 LINC01599Q8WXQ3 324 aa13.48□□□□□ -0.25
DDX54-202ENST00000314045 RERGQ96A58 199 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms