RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ZBED2Q9BTP6 218 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 TTLL2Q9BWV7 592 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 COQ6Q9Y2Z9 468 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 BTN3A3O00478 584 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 LGR5O75473 907 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 AP2A2O94973 939 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 RETP07949 1114 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 PRG2P13727 222 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 STOMP27105 288 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 RORAP35398 523 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 PLEKHN1Q494U1 663 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 PPM1LQ5SGD2 360 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 BRAT1Q6PJG6 821 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ZDHHC24Q6UX98 284 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 QSOX2Q6ZRP7 698 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ZDHHC14Q8IZN3 488 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 SLC25A41Q8N5S1 370 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 TRPV3Q8NET8 790 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 TRPM4Q8TD43 1214 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 MNTQ99583 582 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 CCNKO75909 580 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 CKMP06732 381 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 DARSP14868 501 aaKnown RBP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ATP6AP1Q15904 470 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 TBC1D10BQ4KMP7 808 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 PLEKHG4Q58EX7 1191 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF767PQ75MW2 155 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 LAPTM4BQ86VI4 370 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 LRRN4CLQ8ND94 238 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 OR52K1Q8NGK4 314 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 OSTF1Q92882 214 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 OMA1Q96E52 524 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ACOX2Q99424 681 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 S100A13Q99584 98 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 FNDC11Q9BVV2 318 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 LTBP3Q9NS15 1303 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 RIIAD1A6NNX1 92 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 CD2P06729 351 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ZBTB48P10074 688 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF30P17039 623 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 PSEN2P49810 448 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 SCNN1BP51168 640 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ARFIP1P53367 373 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 RPL7AP62424 266 aaKnown RBP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ACTC1P68032 377 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ACTA1P68133 377 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 SERINC3Q13530 473 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 NRF1Q16656 503 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 HSDL1Q3SXM5 330 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ARL13AQ5H913 290 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 LLGL2Q6P1M3 1020 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ZBTB8BQ8NAP8 495 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF671Q8TAW3 534 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 PHF21BQ96EK2 531 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 MED28Q9H204 178 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 CDT1Q9H211 546 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 SLCO1B3Q9NPD5 702 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ARHGEF4Q9NR80 690 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 SLC7A8Q9UHI5 535 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 TTLL8A6PVC2 850 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 TPST1O60507 370 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 OAS1P00973 400 aaKnown RBP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 PKMP14618 531 aaKnown RBP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 IDH3AP50213 366 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 CAMK1Q14012 370 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 MFSD10Q14728 455 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 KCTD19Q17RG1 926 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 ASRGL1Q7L266 308 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 TRMT11Q7Z4G4 463 aaKnown RBP8.72□□□□□ -1.01
COL6A5-202ENST00000312481 VPS35Q96QK1 796 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 KIFC1Q9BW19 673 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 COLEC10Q9Y6Z7 277 aa8.72□□□□□ -1.01
COL6A5-202ENST00000312481 hCG_2014768A0A024R1R8 64 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 SSNA1O43805 119 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 BMP2P12643 396 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 HSD17B1P14061 328 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 GPR162Q16538 588 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF423Q2M1K9 1284 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 OR4A15Q8NGL6 344 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 UFD1Q92890 307 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 REXO5Q96IC2 774 aaKnown RBP8.71□□□□□ -1.01
COL6A5-202ENST00000312481 NSMCE3Q96MG7 304 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 TXLNGYQ9BZA5 131 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 CCT3P49368 545 aaKnown RBP8.71□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF132P52740 706 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 IQCCQ4KMZ1 466 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 DGKKQ5KSL6 1271 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 TWIST2Q8WVJ9 160 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 VRK1Q99986 396 aaPredicted RBP8.71□□□□□ -1.01
COL6A5-202ENST00000312481 SLC6A16Q9GZN6 736 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 ZNF408Q9H9D4 720 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 C1orf109Q9NX04 203 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 OR14I1A6ND48 311 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 KHKP50053 298 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 EMX2Q04743 252 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 AGMOQ6ZNB7 445 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 POU5F2Q8N7G0 328 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 SLC13A3Q8WWT9 602 aa8.71□□□□□ -1.01
COL6A5-202ENST00000312481 KCTD7Q96MP8 289 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms