RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PTGDR2Q9Y5Y4 395 aa20.92■□□□□ 0.94
ATG4D-201ENST00000309469 FADS2P1A8MWK0 482 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 EIF3FO00303 357 aaPredicted RBP20.91■□□□□ 0.94
ATG4D-201ENST00000309469 GIPC1O14908 333 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 MTX2O75431 263 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 LMNAP02545 664 aaKnown RBP20.91■□□□□ 0.94
ATG4D-201ENST00000309469 VCLP18206 1134 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 ITGB7P26010 798 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 GJA4P35212 333 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 PKNOX1P55347 436 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 CDC16Q13042 620 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 ELAVL3Q14576 367 aaKnown RBP20.91■□□□□ 0.94
ATG4D-201ENST00000309469 ACOX1Q15067 660 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 EFL1Q7Z2Z2 1120 aaKnown RBP20.91■□□□□ 0.94
ATG4D-201ENST00000309469 DDHD1Q8NEL9 900 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 ARRDC3Q96B67 414 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 TIFAQ96CG3 184 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 MYADMQ96S97 322 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 FAM129BQ96TA1 746 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 RDH14Q9HBH5 336 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 FBRSL1Q9HCM7 1045 aaKnown RBP20.91■□□□□ 0.94
ATG4D-201ENST00000309469 NOP53Q9NZM5 478 aaKnown RBP20.91■□□□□ 0.94
ATG4D-201ENST00000309469 SUN2Q9UH99 717 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 BTRCQ9Y297 605 aa20.91■□□□□ 0.94
ATG4D-201ENST00000309469 PSMD11O00231 422 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 TAPBPO15533 448 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 LINC00032P0C843 101 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 MSH3P20585 1137 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 NUDT2P50583 147 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 ATAT1Q5SQI0 421 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 ICE2Q659A1 982 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 SULT1C3Q6IMI6 304 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 SERPINA13PQ6UXR4 307 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 NRSN1Q8IZ57 195 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 KYQ8NBH2 561 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 UCMAQ8WVF2 138 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 EGFL8Q99944 293 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 NOL11Q9H8H0 719 aaKnown RBP20.9■□□□□ 0.94
ATG4D-201ENST00000309469 NKX1-2Q9UD57 310 aaPredicted RBP20.9■□□□□ 0.94
ATG4D-201ENST00000309469 PLXNB3Q9ULL4 1909 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 PSMD12O00232 456 aaPredicted RBP20.9■□□□□ 0.94
ATG4D-201ENST00000309469 AP2A2O94973 939 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 ATP4BP51164 291 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 PTK2BQ14289 1009 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 FASTKQ14296 549 aaKnown RBP20.9■□□□□ 0.94
ATG4D-201ENST00000309469 GBX1Q14549 363 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 WLSQ5T9L3 541 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 C6orf163Q5TEZ5 329 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 PGM2L1Q6PCE3 622 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 FBXL19Q6PCT2 694 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 GOLGA7Q7Z5G4 137 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 PHYKPLQ8IUZ5 450 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 ENDOVQ8N8Q3 282 aaKnown RBP20.9■□□□□ 0.94
ATG4D-201ENST00000309469 OR52B6Q8NGF0 335 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 HMGCLL1Q8TB92 370 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 BTN2A2Q8WVV5 523 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 RCN3Q96D15 328 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 GDF15Q99988 308 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 WRAP53Q9BUR4 548 aaKnown RBP20.9■□□□□ 0.94
ATG4D-201ENST00000309469 DCLRE1BQ9H816 532 aa20.9■□□□□ 0.94
ATG4D-201ENST00000309469 LAMA3Q16787 3333 aa20.89■□□□□ 0.94
ATG4D-201ENST00000309469 H0Y858 1186 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 WNT9AO14904 365 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 SPINT1O43278 529 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 VPS4BO75351 444 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 OR4F21O95013 312 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 CHEK2O96017 543 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 HSPA7P48741 367 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 ERVPABLB-1P60509 514 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 HSPA14Q0VDF9 509 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 GTF2H2Q13888 395 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 TRMT5Q32P41 509 aaKnown RBP20.89■□□□□ 0.93
ATG4D-201ENST00000309469 GTF2H2CQ6P1K8 395 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 RHBDF1Q96CC6 855 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 AP2M1Q96CW1 435 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 TUBGCP3Q96CW5 907 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 VPS35Q96QK1 796 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 EFCAB1Q9HAE3 211 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 EBF2Q9HAK2 575 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 POLG2Q9UHN1 485 aa20.89■□□□□ 0.93
ATG4D-201ENST00000309469 OR7A17O14581 309 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 KPNA5O15131 536 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 SGTAO43765 313 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 NUAK1O60285 661 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 ALDOCP09972 364 aaKnown RBP20.88■□□□□ 0.93
ATG4D-201ENST00000309469 PSMC3P17980 439 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 TBL3Q12788 808 aaKnown RBP20.88■□□□□ 0.93
ATG4D-201ENST00000309469 MAPRE2Q15555 327 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 PREPLQ4J6C6 727 aaPredicted RBP20.88■□□□□ 0.93
ATG4D-201ENST00000309469 AGKQ53H12 422 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 LDLRAP1Q5SW96 308 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 PLEKHS1Q5SXH7 462 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 C16orf89Q6UX73 402 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 GK5Q6ZS86 529 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 RAVER1Q8IY67 606 aaKnown RBP20.88■□□□□ 0.93
ATG4D-201ENST00000309469 DSELQ8IZU8 1212 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 SUSD6Q92537 303 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 COQ10AQ96MF6 247 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 KXD1Q9BQD3 176 aa20.88■□□□□ 0.93
ATG4D-201ENST00000309469 CD244Q9BZW8 370 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms