RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 SLC3A2P08195 630 aaKnown RBP1.23□□□□□ -2.21
CEP290-201ENST00000309041 SMIM10L1P0DMW3 83 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 CLUP10909 449 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 JAK1P23458 1154 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 DCKP27707 260 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 ACSL1P33121 698 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 PRSS3P35030 304 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 FRKP42685 505 aaPredicted RBP1.23□□□□□ -2.21
CEP290-201ENST00000309041 CCR10P46092 362 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 IDH2P48735 452 aaKnown RBP1.23□□□□□ -2.21
CEP290-201ENST00000309041 HSPA7P48741 367 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 TUBB4BP68371 445 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 SH3BP2P78314 561 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 SNTB1Q13884 538 aaKnown RBP1.23□□□□□ -2.21
CEP290-201ENST00000309041 SLMAPQ14BN4 828 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 ZC3H12AQ5D1E8 599 aaKnown RBP1.23□□□□□ -2.21
CEP290-201ENST00000309041 OR2B11Q5JQS5 317 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 ZNF697Q5TEC3 545 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 TEX38Q6PEX7 206 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 RNF180Q86T96 592 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 LRRC6Q86X45 466 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 TBC1D10CQ8IV04 446 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 MFSD9Q8NBP5 474 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 SRFBP1Q8NEF9 429 aaKnown RBP1.23□□□□□ -2.21
CEP290-201ENST00000309041 IL17RDQ8NFM7 739 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 HTR3CQ8WXA8 447 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 WDR89Q96FK6 387 aaPredicted RBP1.23□□□□□ -2.21
CEP290-201ENST00000309041 SMARCD1Q96GM5 515 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 SMIM10Q96HG1 83 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 PPP1R10Q96QC0 940 aaKnown RBP1.23□□□□□ -2.21
CEP290-201ENST00000309041 TTC1Q99614 292 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 ELOVL4Q9GZR5 314 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 USP44Q9H0E7 712 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 LRRN3Q9H3W5 708 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 RPF1Q9H9Y2 349 aaKnown RBP1.23□□□□□ -2.21
CEP290-201ENST00000309041 CYP3A43Q9HB55 503 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 MRPS30Q9NP92 439 aaKnown RBP1.23□□□□□ -2.21
CEP290-201ENST00000309041 DNAJC17Q9NVM6 304 aaKnown RBP1.23□□□□□ -2.21
CEP290-201ENST00000309041 EDARQ9UNE0 448 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 POFUT2Q9Y2G5 429 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 ATP8A1Q9Y2Q0 1164 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 FRMPD3Q5JV73 1810 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 KIDINS220Q9ULH0 1771 aa1.23□□□□□ -2.21
CEP290-201ENST00000309041 COL4A1P02462 1669 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 LOC100289279A0A1B0GTE1 492 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 PLSCR5A0PG75 271 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ZNF320A2RRD8 509 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 PMM2O15305 246 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 UBOX5O94941 541 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 NUDT14O95848 222 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 PYGLP06737 847 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 SRPRAP08240 638 aaKnown RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 HAPLN1P10915 354 aaPredicted RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 SPNP16150 400 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 CEBPBP17676 345 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 PFKLP17858 780 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ATP4AP20648 1035 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 PCSK6P29122 969 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 SYNJ2BPP57105 145 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 PLP1P60201 277 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 CCT2P78371 535 aaKnown RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 GNA12Q03113 381 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 TRAF1Q13077 416 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 TTLL12Q14166 644 aaPredicted RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 CSHL1Q14406 222 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 POSTNQ15063 836 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 LLGL1Q15334 1064 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 PRR4Q16378 134 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 KYNUQ16719 465 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 SOWAHAQ2M3V2 549 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 P3H1Q32P28 736 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 KBTBD12Q3ZCT8 623 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ACSF3Q4G176 576 aaPredicted RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 RAB41Q5JT25 222 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 CATSPEREQ5SY80 951 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 FAM102AQ5T9C2 384 aaPredicted RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 WASH2PQ6VEQ5 465 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 KIAA0408Q6ZU52 694 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 SPATA21Q7Z572 469 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 TSPYL5Q86VY4 417 aaPredicted RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 WFDC3Q8IUB2 231 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 SUGP1Q8IWZ8 645 aaKnown RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 DMRTC2Q8IXT2 367 aaPredicted RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 RNF175Q8N4F7 328 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 DNAAF3Q8N9W5 541 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 SUMF1Q8NBK3 374 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 GMCL1P1Q8NEA9 526 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 FBXL13Q8NEE6 735 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 NTN5Q8WTR8 489 aaPredicted RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 LENG1Q96BZ8 264 aaPredicted RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 LINGO1Q96FE5 620 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 C16orf58Q96GQ5 468 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 PYURFQ96I23 114 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 PGLYRP3Q96LB9 341 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 RBM4BQ9BQ04 359 aaKnown RBP1.22□□□□□ -2.21
CEP290-201ENST00000309041 LPAR5Q9H1C0 372 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 CXorf21Q9HAI6 301 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 XAGE1AQ9HD64 81 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 MID1IP1Q9NPA3 183 aa1.22□□□□□ -2.21
CEP290-201ENST00000309041 ZNF446Q9NWS9 450 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms