RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 EBNA1BP2Q99848 306 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 SYT15Q9BQS2 421 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 ZNF670Q9BS34 389 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 FAM167BQ9BTA0 163 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 CCDC106Q9BWC9 280 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 EPB41L1Q9H4G0 881 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 ASB7Q9H672 318 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 ZWILCHQ9H900 591 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 RPF1Q9H9Y2 349 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 POPDC2Q9HBU9 364 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 PAPOLBQ9NRJ5 636 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 METTL5Q9NRN9 209 aaKnown RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 TMEM30AQ9NV96 361 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 KLHL11Q9NVR0 708 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 DPP3Q9NY33 737 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 ITGA11Q9UKX5 1188 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 MAGED2Q9UNF1 606 aaPredicted RBP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.9□□□□□ -1.63
CKS1B-201ENST00000308987 PLA2G4CQ9UP65 541 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 CHMP2BQ9UQN3 213 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 NME7Q9Y5B8 376 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 COL6A6A6NMZ7 2263 aa4.9□□□□□ -1.63
CKS1B-201ENST00000308987 TDRD6O60522 2096 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 SPAARA0A1B0GVQ0 90 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 TCRBV7S3A2A0A539 114 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 WDR91A4D1P6 747 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 SDR42E2A6NKP2 422 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 C2CD4BA6NLJ0 364 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 ENO4A6NNW6 628 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 HACD1B0YJ81 288 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 H0Y3Z8 333 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 GOLGA8SH3BPF8 625 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 GOLGA8MH3BSY2 632 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 H7C0C1 242 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 PDLIM1O00151 329 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 APOL1O14791 398 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 SLC22A2O15244 555 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 PRPSAP2O60256 369 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 ATG13O75143 517 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 GLRA3O75311 464 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 BANF1O75531 89 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 KRT36O76013 467 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 ALDH1A2O94788 518 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 RHOBTB1O94844 696 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 CYP17A1P05093 508 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 CEACAM1P13688 526 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 ANPEPP15144 967 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 CD19P15391 556 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 ALOX15P16050 662 aaPredicted RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 ZNF16P17020 682 aaPredicted RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 CSRP1P21291 193 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 FDFT1P37268 417 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 AVPR1AP37288 418 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 P2RY2P41231 377 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 GPD2P43304 727 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 PTPN9P43378 593 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 ATP5OP48047 213 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 TAF6P49848 677 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 CACNA2D1P54289 1103 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 INHBCP55103 352 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 CDH6P55285 790 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 TMPRSS15P98073 1019 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 DGCR2P98153 550 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 GAD2Q05329 585 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 BTKQ06187 659 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 INCA1Q0VD86 236 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 BST1Q10588 318 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 STX3Q13277 289 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 SEMA5AQ13591 1074 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 THOC5Q13769 683 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 RCN2Q14257 317 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 EFTUD2Q15029 972 aaKnown RBP eCLIP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 PDGFRLQ15198 375 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 UAP1L1Q3KQV9 507 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 C2orf27AQ580R0 203 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 METTL21CQ5VZV1 264 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 AP1ARQ63HQ0 302 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 TCTN3Q6NUS6 607 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 PGM2L1Q6PCE3 622 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 TEPPQ6URK8 271 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 LCLAT1Q6UWP7 414 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 CYP4V2Q6ZWL3 525 aaPredicted RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 CAND1Q86VP6 1230 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 PSTKQ8IV42 348 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 KIRREL3Q8IZU9 778 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 PLD5Q8N7P1 536 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 C19orf47Q8N9M1 422 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 IL17RCQ8NAC3 791 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 RBM15BQ8NDT2 890 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 OR2I1PQ8NGU4 316 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 GSDMBQ8TAX9 411 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 SPPL2BQ8TCT7 592 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 SH3RF2Q8TEC5 729 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 FRS2Q8WU20 508 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 NRG4Q8WWG1 115 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 ZCCHC14Q8WYQ9 949 aaKnown RBP4.89□□□□□ -1.63
CKS1B-201ENST00000308987 PIGKQ92643 395 aa4.89□□□□□ -1.63
CKS1B-201ENST00000308987 EXTL1Q92935 676 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms