RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PIANPQ8IYJ0 282 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 TAB3Q8N5C8 712 aaPredicted RBP19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 SPDYE1Q8NFV5 336 aaPredicted RBP19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 OR2L2Q8NH16 312 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 C1orf54Q8WWF1 131 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 INSM2Q96T92 566 aaPredicted RBP19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 TLR10Q9BXR5 811 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 RAB33BQ9H082 229 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 FBXO8Q9NRD0 319 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 SLC39A1Q9NY26 324 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 SEMA5BQ9P283 1151 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 EPHA6Q9UF33 1036 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 KLHL3Q9UH77 587 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 PILRAQ9UKJ1 303 aa19.41■□□□□ 0.7
PDZRN3-202ENST00000308537 SPTA1P02549 2419 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 BOD1L1Q8NFC6 3051 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 KIF1CO43896 1103 aaKnown RBP19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 SUN1O94901 812 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 ETS1P14921 441 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 AKT1P31749 480 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 STIP1P31948 543 aaKnown RBP19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 MC4RP32245 332 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 HADHAP40939 763 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 SEL1L2Q5TEA6 688 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 TMEM164Q5U3C3 297 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 FAM129CQ86XR2 697 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 TRIM48Q8IWZ4 208 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 CCDC112Q8NEF3 446 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 WBP1Q96G27 269 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 CDKN2AIPNLQ96HQ2 116 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 RMDN2Q96LZ7 410 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 FRMD8P1Q9BZ68 369 aaPredicted RBP19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 SEMA4CQ9C0C4 833 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 ETNK1Q9HBU6 452 aa19.4■□□□□ 0.7
PDZRN3-202ENST00000308537 STMND1H3BQB6 276 aa19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 CAPN5O15484 640 aaPredicted RBP19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 MTHFD1P11586 935 aaKnown RBP19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 PBLDP30039 288 aaPredicted RBP19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 RAB15P59190 212 aa19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 POU6F1Q14863 301 aa19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 GPR33Q49SQ1 333 aa19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 CAPRIN2Q6IMN6 1127 aaKnown RBP19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 DUS1LQ6P1R4 473 aaKnown RBP19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 TIPARPQ7Z3E1 657 aaKnown RBP19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 OR52K1Q8NGK4 314 aa19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 JPH3Q8WXH2 748 aaPredicted RBP19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 ULK4Q96C45 1275 aa19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 CXorf40BQ96DE9 158 aa19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 CTRCQ99895 268 aa19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 WWP1Q9H0M0 922 aa19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 CRLS1Q9UJA2 301 aa19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 PCDHGA4Q9Y5G9 962 aa19.39■□□□□ 0.69
PDZRN3-202ENST00000308537 TOX3O15405 576 aaPredicted RBP19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 DLGAP3O95886 979 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 PTMAP06454 111 aaKnown RBP19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 SPTBP11277 2137 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 ITGALP20701 1170 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 ACRV1P26436 265 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 SEMA5AQ13591 1074 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 RPS6KA1Q15418 735 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 DCAF12Q5T6F0 453 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 PRSS42Q7Z5A4 293 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 SERPINA9Q86WD7 417 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 OR13J1Q8NGT2 312 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 STYXQ8WUJ0 223 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 KLHL6Q8WZ60 621 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 TGM7Q96PF1 710 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 COPS8Q99627 209 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 ASPSCR1Q9BZE9 553 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 ZMYND15Q9H091 742 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 ZNF768Q9H5H4 540 aaKnown RBP19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 LZTFL1Q9NQ48 299 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 ZDHHC3Q9NYG2 299 aa19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 TMEM184BQ9Y519 407 aaPredicted RBP19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 CFAP20Q9Y6A4 193 aaKnown RBP19.38■□□□□ 0.69
PDZRN3-202ENST00000308537 KLHL33A6NCF5 533 aa19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 ERI2A8K979 691 aaKnown RBP19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 PSMD3O43242 534 aa19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 CCDC175P0C221 793 aa19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 ATP1B2P14415 290 aaPredicted RBP19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 FOXN2P32314 431 aa19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 HALP42357 657 aa19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 SH3BP2P78314 561 aa19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 DBN1Q16643 649 aa19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 LINC00303Q3SY05 128 aa19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 MANEAQ5SRI9 462 aa19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 DRICH1Q6PGQ1 229 aaPredicted RBP19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 ZNF778Q96MU6 729 aa19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 TEFMQ96QE5 360 aaKnown RBP19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 CASS4Q9NQ75 786 aa19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 ACSL5Q9ULC5 683 aa19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 PRSS21Q9Y6M0 314 aa19.37■□□□□ 0.69
PDZRN3-202ENST00000308537 C17orf113A0A1B0GUU1 675 aa19.36■□□□□ 0.69
PDZRN3-202ENST00000308537 OR51F1A6NGY5 319 aa19.36■□□□□ 0.69
PDZRN3-202ENST00000308537 RAD1O60671 282 aa19.36■□□□□ 0.69
PDZRN3-202ENST00000308537 ZSCAN5DPP0CG00 497 aa19.36■□□□□ 0.69
PDZRN3-202ENST00000308537 AMD1P17707 334 aa19.36■□□□□ 0.69
PDZRN3-202ENST00000308537 ACVR1Q04771 509 aa19.36■□□□□ 0.69
PDZRN3-202ENST00000308537 SNX1Q13596 522 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms