RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 SCAPQ12770 1279 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 EXOC3L2Q2M3D2 409 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 IFI44LQ53G44 452 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 VASH1Q7L8A9 365 aaPredicted RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 RABEPKQ7Z6M1 372 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 NCSTNQ92542 709 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 LPGAT1Q92604 370 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SPACA7Q96KW9 195 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TSGA13Q96PP4 275 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 MND1Q9BWT6 205 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 NT5DC2Q9H857 520 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 RBM22Q9NW64 420 aaKnown RBP eCLIP3.97□□□□□ -1.77
USH2A-201ENST00000307340 ACSL5Q9ULC5 683 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 COL5A3P25940 1745 aaPredicted RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 UBOX5O94941 541 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 PRG2P13727 222 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ERVK-9P63128 1117 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SZRD1Q7Z422 152 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 RASGRP4Q8TDF6 673 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 MALT1Q9UDY8 824 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 PLXNA1Q9UIW2 1896 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 NAP1L6A6NFF2 107 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 GJE1A6NN92 205 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 RCBTB2O95199 551 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 PIGNO95427 931 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 RLN2P04090 185 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 DNAJA1P31689 397 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 MAGEA11P43364 429 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 MRPS5P82675 430 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 LPIN1Q14693 890 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 N4BP2L1Q5TBK1 243 aaPredicted RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 CDCA2Q69YH5 1023 aaPredicted RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 DBNDD1Q9H9R9 158 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 MYO1GB0I1T2 1018 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SEC24AO95486 1093 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 S100A6P06703 90 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 IL3P08700 152 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 KCNJ1P48048 391 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 IDNKQ5T6J7 187 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 CAPN13Q6MZZ7 669 aaPredicted RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 P2RY8Q86VZ1 359 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SLITRK4Q8IW52 837 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 KCNV2Q8TDN2 545 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SLC38A4Q969I6 547 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 GPR20Q99678 358 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TARS2Q9BW92 718 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 SLC22A4Q9H015 551 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ZBTB26Q9HCK0 441 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ARMC1Q9NVT9 282 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 RIIAD1A6NNX1 92 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 A8MVJ9 347 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 FABP3P05413 133 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 PSKH1P11801 424 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 NOMO3P69849 1222 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 PFKPQ01813 784 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ADAM15Q13444 863 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 AUHQ13825 339 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 ZBTB33Q86T24 672 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 GPIHBP1Q8IV16 184 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 HS6ST3Q8IZP7 471 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 BCL7CQ8WUZ0 217 aaPredicted RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 ANKRD49Q8WVL7 239 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 LRRC46Q96FV0 321 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 POTEKPQ9BYX7 375 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 PRDM9Q9NQV7 894 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 MAN1C1Q9NR34 630 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TAF1P21675 1872 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 LRRC14BA6NHZ5 514 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 C9P02748 559 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 UQCRC1P31930 480 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ELK3P41970 407 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 NPTX1Q15818 432 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ZBTB6Q15916 424 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 COLEC12Q5KU26 742 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TMEM110Q86TL2 294 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 HID1Q8IV36 788 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TNS4Q8IZW8 715 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 AP2M1Q96CW1 435 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 NPAS2Q99743 824 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 DERL2Q9GZP9 239 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 WDR55Q9H6Y2 383 aaPredicted RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 DNAJB9Q9UBS3 223 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SNCAIPQ9Y6H5 919 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 C1orf232A0A0U1RR37 186 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 PROCP04070 461 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 GNAO1P09471 354 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 RPS9P46781 194 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 CPTPQ5TA50 214 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 IRF2BP2Q7Z5L9 587 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 MEIOBQ8N635 442 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 SARS2Q9NP81 518 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 MID1IP1Q9NPA3 183 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 ABI3Q9P2A4 366 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 COL24A1Q17RW2 1714 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TRAPPC13A5PLN9 417 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 WNT10BO00744 389 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 TPP1O14773 563 aa3.97□□□□□ -1.77
USH2A-201ENST00000307340 DENRO43583 198 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 RPP40O75818 363 aaKnown RBP3.97□□□□□ -1.77
USH2A-201ENST00000307340 CLPXO76031 633 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms