RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 METAP1P53582 386 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 ERVK-21P61565 698 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 POLR2LP62875 67 aaKnown RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 RALGDSQ12967 914 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 ART3Q13508 389 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 KCNC3Q14003 757 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 ZXDCQ2QGD7 858 aaPredicted RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 POM121L1PQ3SYA9 428 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 C8orf82Q6P1X6 216 aaPredicted RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 AAGABQ6PD74 315 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 Q6ZVL8 140 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 FRA10AC1Q70Z53 315 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 DET1Q7L5Y6 550 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 GOLGA7Q7Z5G4 137 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 KBTBD6Q86V97 674 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 RETREG3Q86VR2 466 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 SFTPA1Q8IWL2 248 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 NPAS3Q8IXF0 933 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 ETFBKMTQ8IXQ9 262 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 KBTBD2Q8IY47 623 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 MYO1HQ8N1T3 1032 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 CDYL2Q8N8U2 506 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 HIPK4Q8NE63 616 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 OR56A4Q8NGH8 313 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 SLC26A7Q8TE54 656 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 TMEM79Q9BSE2 394 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 MRPL1Q9BYD6 325 aaKnown RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 PIDD1Q9HB75 910 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 SDR39U1Q9NRG7 319 aaPredicted RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 SARDHQ9UL12 918 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 C2orf16Q68DN1 1984 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 A0A1W2PQ67 120 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 E7ENX8 843 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 SGTAO43765 313 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 MTX2O75431 263 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 LBPP18428 481 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 VHLP40337 213 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 RECQLP46063 649 aaPredicted RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 ZFP36L2P47974 494 aaKnown RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 NRIP1P48552 1158 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 HSPA7P48741 367 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 RGS4P49798 205 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 VASPP50552 380 aaPredicted RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 NAA20P61599 178 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 YBX1P67809 324 aaKnown RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 CREB5Q02930 508 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 TRAF3Q13114 568 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 STX5Q13190 355 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 GTF2H2Q13888 395 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 GBX1Q14549 363 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 NAIF1Q69YI7 327 aaPredicted RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 PDE12Q6L8Q7 609 aaKnown RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 GTF2H2CQ6P1K8 395 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 SERPINA13PQ6UXR4 307 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 MBOAT1Q6ZNC8 495 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 Q6ZSR9 355 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 VRK3Q8IV63 474 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 FAM156AQ8NDB6 213 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 GDPD5Q8WTR4 605 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 RHBDF1Q96CC6 855 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 LRCH3Q96II8 777 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 TEX37Q96LM6 180 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 APOL5Q9BWW9 433 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 NUSAP1Q9BXS6 441 aaKnown RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 FAM126AQ9BYI3 521 aaPredicted RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 EBF3Q9H4W6 596 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 MAP10Q9P2G4 905 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 IL36AQ9UHA7 158 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 GPR45Q9Y5Y3 372 aa6.44□□□□□ -1.38
USP47-201ENST00000305481 NUP210Q8TEM1 1887 aaPredicted RBP6.44□□□□□ -1.38
USP47-201ENST00000305481 ANTXRLA6NF34 631 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 FADS2P1A8MWK0 482 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 UPK3BL1B0FP48 263 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 UPK3BL2E5RIL1 263 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 ACOT8O14734 319 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 RAD51BO15315 384 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 SPINT1O43278 529 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 FKBP6O75344 327 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 AOAHP28039 575 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 HTR6P50406 440 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 PSME3P61289 254 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 AP2B1P63010 937 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 BIRC2Q13490 618 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 SHHQ15465 462 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 ZNF805Q5CZA5 627 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 ZNF648Q5T619 568 aaPredicted RBP6.43□□□□□ -1.38
USP47-201ENST00000305481 ZDHHC20Q5W0Z9 365 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 OGFOD2Q6N063 350 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 OR4F6Q8NGB9 312 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 FGF13Q92913 245 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 ASB16Q96NS5 453 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 SPATA16Q9BXB7 569 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 MTIF3Q9H2K0 278 aaKnown RBP6.43□□□□□ -1.38
USP47-201ENST00000305481 MRGBPQ9NV56 204 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 SMOXQ9NWM0 555 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 KCTD5Q9NXV2 234 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 SLC27A6Q9Y2P4 619 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 EYSQ5T1H1 3165 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 C16orf96A6NNT2 1141 aa6.43□□□□□ -1.38
USP47-201ENST00000305481 NVLO15381 856 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms