RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SOWAHCQ53LP3 525 aaPredicted RBP25.9■■□□□ 1.74
CDKN2A-201ENST00000304494 DCAF12Q5T6F0 453 aa25.9■■□□□ 1.74
CDKN2A-201ENST00000304494 DRICH1Q6PGQ1 229 aaPredicted RBP25.9■■□□□ 1.74
CDKN2A-201ENST00000304494 INO80CQ6PI98 192 aaPredicted RBP25.9■■□□□ 1.74
CDKN2A-201ENST00000304494 PPP1R21Q6ZMI0 780 aa25.9■■□□□ 1.74
CDKN2A-201ENST00000304494 OR52K1Q8NGK4 314 aa25.9■■□□□ 1.74
CDKN2A-201ENST00000304494 CDKN2AIPNLQ96HQ2 116 aa25.9■■□□□ 1.74
CDKN2A-201ENST00000304494 TLR10Q9BXR5 811 aa25.9■■□□□ 1.74
CDKN2A-201ENST00000304494 TRBV5-4A0A0C4DH59 114 aa25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 TOX3O15405 576 aaPredicted RBP25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 FGGP02679 453 aa25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 ACRV1P26436 265 aa25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 CAPZBP47756 277 aa25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 PRLHRP49683 370 aa25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 CACNG1Q06432 222 aa25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 SEMA5AQ13591 1074 aa25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 SIX1Q15475 284 aaPredicted RBP25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 TGIF1Q15583 401 aa25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 TAS2R42Q7RTR8 314 aa25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 DTX1Q86Y01 620 aa25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 BMPERQ8N8U9 685 aa25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 C9orf72Q96LT7 481 aa25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 TEFMQ96QE5 360 aaKnown RBP25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 VPS37BQ9H9H4 285 aa25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 DRG1Q9Y295 367 aaKnown RBP25.89■■□□□ 1.74
CDKN2A-201ENST00000304494 PTPRQQ9UMZ3 2332 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 IGLV3-16A0A075B6K0 115 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 HEATR9A2RTY3 570 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 CAPN5O15484 640 aaPredicted RBP25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 SGTAO43765 313 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 SLC35G4P0C7Q5 338 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 MTHFD1P11586 935 aaKnown RBP25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 PSMA3P25788 255 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 MC2RQ01718 297 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 RHDQ02161 417 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 KLHL35Q6PF15 583 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 C4orf22Q6V702 233 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 SERPINA9Q86WD7 417 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 HM13Q8TCT9 377 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 ZDHHC12Q96GR4 267 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 TGM7Q96PF1 710 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 ZPBPQ9BS86 351 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 WWP1Q9H0M0 922 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 FBXO8Q9NRD0 319 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 IMP3Q9NV31 184 aaKnown RBP25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 B3GALT1Q9Y5Z6 326 aa25.88■■□□□ 1.73
CDKN2A-201ENST00000304494 C17orf113A0A1B0GUU1 675 aa25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 EIF4E1BA6NMX2 242 aaKnown RBP25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 GFERP55789 205 aa25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 MANEAQ5SRI9 462 aa25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 LSM14AQ8ND56 463 aaKnown RBP25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 GPR150Q8NGU9 434 aa25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 NAT14Q8WUY8 206 aa25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 ZFPM2Q8WW38 1151 aa25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 CCM2Q9BSQ5 444 aa25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 RAB33BQ9H082 229 aa25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 GRPEL1Q9HAV7 217 aa25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 HOMER3Q9NSC5 361 aa25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 FAM8A1Q9UBU6 413 aa25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 IGSF10Q6WRI0 2623 aa25.87■■□□□ 1.73
CDKN2A-201ENST00000304494 ATXN7O15265 892 aaPredicted RBP25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 CEP104O60308 925 aa25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 APRTP07741 180 aa25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 ETS1P14921 441 aa25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 CDKN1CP49918 316 aaPredicted RBP25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 ANKS6Q68DC2 871 aa25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 CEACAM20Q6UY09 585 aa25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 GSTA5Q7RTV2 222 aa25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 CFAP206Q8IYR0 622 aa25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 RSC1A1Q92681 617 aa25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 PMEPA1Q969W9 287 aa25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 C12orf66Q96MD2 445 aa25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 BBC3Q96PG8 261 aaPredicted RBP25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 RANBP9Q96S59 729 aa25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 EPHA6Q9UF33 1036 aa25.86■■□□□ 1.73
CDKN2A-201ENST00000304494 ERVH48-1M5A8F1 160 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 RASSF9O75901 435 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 GSTM1P09488 218 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 MSNP26038 577 aaKnown RBP25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 ATP1A2P50993 1020 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 ARSDP51689 593 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 GSTM4Q03013 218 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 PLCL1Q15111 1095 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 CCDC38Q502W7 563 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 PRUNE1Q86TP1 453 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 GLIS1Q8NBF1 620 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 INSM2Q96T92 566 aaPredicted RBP25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 ZNF768Q9H5H4 540 aaKnown RBP25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 CASS4Q9NQ75 786 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 RIMKLBQ9ULI2 386 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 HEBP2Q9Y5Z4 205 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 CFAP20Q9Y6A4 193 aaKnown RBP25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 COLEC10Q9Y6Z7 277 aa25.85■■□□□ 1.73
CDKN2A-201ENST00000304494 CCDC78A2IDD5 438 aa25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 TK2O00142 265 aa25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 AP2A2O94973 939 aa25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 POLBP06746 335 aa25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 ZSCAN5DPP0CG00 497 aa25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 ADRA1DP25100 572 aa25.84■■□□□ 1.73
CDKN2A-201ENST00000304494 CXCR5P32302 372 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms