RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 CDYL2Q8N8U2 506 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 C11orf65Q8NCR3 313 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ALG3Q92685 438 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 USP29Q9HBJ7 922 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PCDHB3Q9Y5E6 796 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 MYH1P12882 1939 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 INPP4BO15327 924 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 RAD17O75943 681 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TRUB2O95900 331 aaKnown RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 UGT2B4P06133 528 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CYP2A6P11509 494 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PRKCDQ05655 676 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 DPYSL2Q16555 572 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CYP2A13Q16696 494 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 AARDQ4LEZ3 155 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ACSBG2Q5FVE4 666 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 GPR158Q5T848 1215 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TIGD3Q6B0B8 471 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TMEM199Q8N511 208 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CMASQ8NFW8 434 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PIGBQ92521 554 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 CELF1Q92879 486 aaKnown RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 SEMA4CQ9C0C4 833 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 RYDENQ9NUL5 291 aaKnown RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 SLC39A1Q9NY26 324 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 UXTQ9UBK9 157 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 GHRLQ9UBU3 117 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF282Q9UDV7 671 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF175Q9Y473 711 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PSMD10O75832 226 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PLEKP08567 350 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TFEBP19484 476 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 PPM1AP35813 382 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TRIM23P36406 574 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ACTC1P68032 377 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ACTA1P68133 377 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 KEAP1Q14145 624 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 MARC1Q5VT66 337 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 KANK2Q63ZY3 851 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 EPGNQ6UW88 154 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 GPIHBP1Q8IV16 184 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 TTLQ8NG68 377 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 OR52E4Q8NGH9 312 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 SUN3Q8TAQ9 357 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 KLHL6Q8WZ60 621 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 RANBP9Q96S59 729 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 MRPL9Q9BYD2 267 aaKnown RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 ALG2Q9H553 416 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 FAM120CQ9NX05 1096 aaKnown RBP5.19□□□□□ -1.58
SCN1A-201ENST00000303395 UBIAD1Q9Y5Z9 338 aa5.19□□□□□ -1.58
SCN1A-201ENST00000303395 NUP188Q5SRE5 1749 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 SPATA31A5Q5VU36 1347 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 SPATA31A7Q8IWB4 1347 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 CXorf51AA0A1B0GTR3 108 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 CLDN24A6NM45 220 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 H3BN98 237 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 EIF1AYO14602 144 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 MOCS2O96007 188 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 COL6A1P12109 1028 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 RPS2P15880 293 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 EIF1AXP47813 144 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 CHST15Q7LFX5 561 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 DSELQ8IZU8 1212 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 DNAAF1Q8NEP3 725 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 MIPEPQ99797 713 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 GSDMCQ9BYG8 508 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 MED28Q9H204 178 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 SEMA6CQ9H3T2 930 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 INPP5EQ9NRR6 644 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 BTG4Q9NY30 223 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 CNTN3Q9P232 1028 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ACSL5Q9ULC5 683 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 MAST2Q6P0Q8 1798 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 A0A1B0GVM2 712 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 XRCC1P18887 633 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 CD53P19397 219 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 HTR1EP28566 365 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 DNAJA1P31689 397 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 MRPL19P49406 292 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 MRPS22P82650 360 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 GHRHRQ02643 423 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 POU4F2Q12837 409 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 BAATQ14032 418 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 FAM76BQ5HYJ3 339 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ALG10BQ5I7T1 473 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 AADACL4Q5VUY2 407 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 PNCKQ6P2M8 343 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ZDHHC24Q6UX98 284 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF781Q8N8C0 355 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 IPMKQ8NFU5 416 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 SETD7Q8WTS6 366 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 PMM1Q92871 262 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF570Q96NI8 536 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 DHRS4Q9BTZ2 278 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 FTHL17Q9BXU8 183 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 ITPAQ9BY32 194 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 CNOT2Q9NZN8 540 aaKnown RBP5.18□□□□□ -1.58
SCN1A-201ENST00000303395 STYXL1Q9Y6J8 313 aa5.18□□□□□ -1.58
SCN1A-201ENST00000303395 FAM240BA0A1B0GVZ2 78 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms