RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ASB1Q9Y576 335 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.48□□□□□ -0.09
COL6A2-201ENST00000300527 CASTOR2A6NHX0 329 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 MYL3P08590 195 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 CD36P16671 472 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 EMX2Q04743 252 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 ARHGAP1Q07960 439 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 SEMA3AQ14563 771 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 C6orf136Q5SQH8 315 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 ARRDC4Q8NCT1 418 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 RNF38Q9H0F5 515 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 DSN1Q9H410 356 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 IL37Q9NZH6 218 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 VAPAQ9P0L0 249 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 FER1L6Q2WGJ9 1857 aa14.48□□□□□ -0.09
COL6A2-201ENST00000300527 TRIM64BA6NI03 449 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 IDH3BO43837 385 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 ENO2P09104 434 aaPredicted RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 HCAR3P49019 387 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 CYP4F2P78329 520 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 FOXM1Q08050 763 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 CYP4F3Q08477 520 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 GALNT1Q10472 559 aaPredicted RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 SCAPQ12770 1279 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 MADCAM1Q13477 382 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 PTGR1Q14914 329 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 HIST2H2ACQ16777 129 aaPredicted RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 MARC1Q5VT66 337 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 DESI1Q6ICB0 168 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 PTRH1Q86Y79 214 aaKnown RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 RIMKLAQ8IXN7 391 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 PROKR1Q8TCW9 393 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 DNAJB3Q8WWF6 145 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 SMIM14Q96QK8 99 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 CTRCQ99895 268 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 ZBTB20Q9HC78 741 aaPredicted RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 NEK6Q9HC98 313 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 CNGB3Q9NQW8 809 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 SCN3BQ9NY72 215 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 DNAJB9Q9UBS3 223 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 VPS4AQ9UN37 437 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 SLC22A1O15245 554 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 GUCY1B2O75343 617 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 AFF1P51825 1210 aaKnown RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 RPL38P63173 70 aaKnown RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 CDK5R2Q13319 367 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 SIRPB2Q5JXA9 342 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 IRAK1BP1Q5VVH5 260 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 CIR1Q86X95 450 aaPredicted RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 STAG3L4Q8TBR4 150 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 TRPM4Q8TD43 1214 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 LGALS12Q96DT0 336 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 GPR21Q99679 349 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 RBM4BQ9BQ04 359 aaKnown RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 RBM4Q9BWF3 364 aaKnown RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 ROGDIQ9GZN7 287 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 CATSPERBQ9H7T0 1116 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 INTS6Q9UL03 887 aaKnown RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 SIP14410 1827 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 PHIPQ8WWQ0 1821 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 EFCAB9A8MZ26 197 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 PAX3P23760 479 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 TRAF3Q13114 568 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 LAIR2Q6ISS4 152 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 SPATA19Q7Z5L4 167 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 ANKRD46Q86W74 232 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 ZNF641Q96N77 438 aaPredicted RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 TMEM209Q96SK2 561 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 BARD1Q99728 777 aaKnown RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 RMND5AQ9H871 391 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 AGO3Q9H9G7 860 aaKnown RBP14.47□□□□□ -0.09
COL6A2-201ENST00000300527 KLHL3Q9UH77 587 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 ZNF112Q9UJU3 913 aa14.47□□□□□ -0.09
COL6A2-201ENST00000300527 A0A0U1RQS6 177 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 RFPL2O75678 378 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 GUCA1CO95843 209 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 DNTTP04053 509 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 HSMCR30P0CW71 290 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 IGFBP5P24593 272 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 PNPLA4P41247 253 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 RPL34P49207 117 aaKnown RBP14.46□□□□□ -0.09
COL6A2-201ENST00000300527 MRNIPQ6NTE8 343 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 GPRIN3Q6ZVF9 776 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 SCN4BQ8IWT1 228 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 GOLM1Q8NBJ4 401 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 ATL1Q8WXF7 558 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 ZFYVE19Q96K21 471 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 PSD2Q9BQI7 771 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 OSBPL10Q9BXB5 764 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 DCSTAMPQ9H295 470 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 MUC13Q9H3R2 512 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 TRMT13Q9NUP7 481 aaKnown RBP14.46□□□□□ -0.09
COL6A2-201ENST00000300527 GMPPBQ9Y5P6 360 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 DNAH12Q6ZR08 3092 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 FAM234BA2RU67 622 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 TULP3O75386 442 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 CAPN1P07384 714 aa14.46□□□□□ -0.09
COL6A2-201ENST00000300527 HAPLN1P10915 354 aaPredicted RBP14.46□□□□□ -0.09
COL6A2-201ENST00000300527 MYCLP1P12525 358 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms