RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 TRIM74Q86UV6 250 aa25.23■■□□□ 1.63
SDCCAG3-201ENST00000298537 ULK4Q96C45 1275 aa25.23■■□□□ 1.63
SDCCAG3-201ENST00000298537 SLC45A3Q96JT2 553 aa25.23■■□□□ 1.63
SDCCAG3-201ENST00000298537 FAR2Q96K12 515 aa25.23■■□□□ 1.63
SDCCAG3-201ENST00000298537 NUDT4Q9NZJ9 180 aa25.23■■□□□ 1.63
SDCCAG3-201ENST00000298537 FGF4P08620 206 aa25.22■■□□□ 1.63
SDCCAG3-201ENST00000298537 ELAVL3Q14576 367 aaKnown RBP25.22■■□□□ 1.63
SDCCAG3-201ENST00000298537 ZDHHC20Q5W0Z9 365 aa25.22■■□□□ 1.63
SDCCAG3-201ENST00000298537 ERAP2Q6P179 960 aa25.22■■□□□ 1.63
SDCCAG3-201ENST00000298537 FBXL19Q6PCT2 694 aa25.22■■□□□ 1.63
SDCCAG3-201ENST00000298537 LARP4Q71RC2 724 aaKnown RBP eCLIP25.22■■□□□ 1.63
SDCCAG3-201ENST00000298537 DDIASQ8IXT1 998 aa25.22■■□□□ 1.63
SDCCAG3-201ENST00000298537 CMTM5Q96DZ9 223 aa25.22■■□□□ 1.63
SDCCAG3-201ENST00000298537 AKTIPQ9H8T0 292 aa25.22■■□□□ 1.63
SDCCAG3-201ENST00000298537 L3MBTL1Q9Y468 752 aa25.22■■□□□ 1.63
SDCCAG3-201ENST00000298537 LRRK1Q38SD2 2015 aa25.22■■□□□ 1.63
SDCCAG3-201ENST00000298537 AOAHP28039 575 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 CTSCP53634 463 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 DCDC1P59894 354 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 RIPK1Q13546 671 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 GRB7Q14451 532 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 TRAM1L1Q8N609 369 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 LILRA3Q8N6C8 439 aaPredicted RBP25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 ACTRT2Q8TDY3 377 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 AP2M1Q96CW1 435 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 FAM161BQ96MY7 647 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 FAM126AQ9BYI3 521 aaPredicted RBP25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 NOL11Q9H8H0 719 aaKnown RBP25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 PRSS16Q9NQE7 514 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 MMP20O60882 483 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 OR4F21O95013 312 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 ALDOCP09972 364 aaKnown RBP25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 OR56A5P0C7T3 313 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 ITGAXP20702 1163 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 ITGB7P26010 798 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 ERVPABLB-1P60509 514 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 SATB1Q01826 763 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 COL13A1Q5TAT6 717 aaPredicted RBP25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 TXNDC11Q6PKC3 985 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 GK5Q6ZS86 529 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 CHSY3Q70JA7 882 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 AFAP1L2Q8N4X5 818 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 TMEM79Q9BSE2 394 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 SMOXQ9NWM0 555 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 KCTD5Q9NXV2 234 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 PACSIN3Q9UKS6 424 aa25.21■■□□□ 1.63
SDCCAG3-201ENST00000298537 ADRB3P13945 408 aa25.2■■□□□ 1.63
SDCCAG3-201ENST00000298537 PSMD8P48556 350 aa25.2■■□□□ 1.63
SDCCAG3-201ENST00000298537 KPNB1Q14974 876 aaKnown RBP25.2■■□□□ 1.63
SDCCAG3-201ENST00000298537 OR9I1Q8NGQ6 314 aa25.2■■□□□ 1.63
SDCCAG3-201ENST00000298537 CLDND1Q9NY35 253 aa25.2■■□□□ 1.63
SDCCAG3-201ENST00000298537 NKX1-2Q9UD57 310 aaPredicted RBP25.2■■□□□ 1.63
SDCCAG3-201ENST00000298537 OARD1Q9Y530 152 aa25.2■■□□□ 1.63
SDCCAG3-201ENST00000298537 VGLL3A8MV65 326 aa25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 ARNTLO00327 626 aa25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 AIM2O14862 343 aa25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 SOD1P00441 154 aa25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 LETMD1Q6P1Q0 360 aa25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 GOLGA7Q7Z5G4 137 aa25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 TMIEQ8NEW7 156 aa25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 SKA2Q8WVK7 121 aaPredicted RBP25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 SUSD6Q92537 303 aa25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 FOXJ1Q92949 421 aa25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 DCUN1D1Q96GG9 259 aa25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 PANX3Q96QZ0 392 aa25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 HBEGFQ99075 208 aa25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 EGFL8Q99944 293 aa25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 THAP10Q9P2Z0 257 aaPredicted RBP25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 PTBP2Q9UKA9 531 aaKnown RBP25.2■■□□□ 1.62
SDCCAG3-201ENST00000298537 A0A088AWK7 358 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 NME5P56597 212 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 ZXDCQ2QGD7 858 aaPredicted RBP25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 CES5AQ6NT32 575 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 ULK2Q8IYT8 1036 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 CDYL2Q8N8U2 506 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 RASGEF1AQ8N9B8 481 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 HCAR2Q8TDS4 363 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 BTN2A2Q8WVV5 523 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 STON2Q8WXE9 905 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 EZH1Q92800 747 aaPredicted RBP25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 COQ10AQ96MF6 247 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 ASB2Q96Q27 587 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 C1orf21Q9H246 121 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 OR7A17O14581 309 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 WNT9AO14904 365 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 AREL1O15033 823 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 UBDO15205 165 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 RAD51BO15315 384 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 KATNA1O75449 491 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 LTBRP36941 435 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 ZNF284Q2VY69 593 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 PHYKPLQ8IUZ5 450 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 PDPRQ8NCN5 879 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 DDHD1Q8NEL9 900 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 ZSCAN5AQ9BUG6 496 aa25.19■■□□□ 1.62
SDCCAG3-201ENST00000298537 RGSL1A5PLK6 1076 aa25.18■■□□□ 1.62
SDCCAG3-201ENST00000298537 MAGEC1O60732 1142 aa25.18■■□□□ 1.62
SDCCAG3-201ENST00000298537 PEX11AO75192 247 aa25.18■■□□□ 1.62
SDCCAG3-201ENST00000298537 RECQL5O94762 991 aaPredicted RBP25.18■■□□□ 1.62
SDCCAG3-201ENST00000298537 ESRRBO95718 433 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms