RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 RLN1P04808 185 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 RPL4P36578 427 aaKnown RBP16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 CCR4P51679 360 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 USP41Q3LFD5 358 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 C1orf127Q8N9H9 656 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 SLC28A3Q9HAS3 691 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 SRRDQ9UH36 339 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 IGLV3-22A0A075B6J6 115 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 MVKQ03426 396 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 COLEC12Q5KU26 742 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 TP53INP1Q96A56 240 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 VMP1Q96GC9 406 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 ANKRA2Q9H9E1 313 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 DNAJC11Q9NVH1 559 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 DTLQ9NZJ0 730 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 TMED5Q9Y3A6 229 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 OR4F21O95013 312 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 GJB1P08034 283 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 CTPS1P17812 591 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 MXD1Q05195 221 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 ABRQ12979 859 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 LDB1Q86U70 411 aaPredicted RBP16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 MON1AQ86VX9 555 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 SPATA22Q8NHS9 363 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 ZNF358Q9NW07 568 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 DUOX1Q9NRD9 1551 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 BCAS2O75934 225 aaPredicted RBP16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 PRPS2P11908 318 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 MANFP55145 182 aaKnown RBP16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 ZNF460Q14592 562 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 DOK6Q6PKX4 331 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 CERS6Q6ZMG9 384 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 C7orf43Q8WVR3 580 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 SLC22A4Q9H015 551 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 KCTD5Q9NXV2 234 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 SEC14L3Q9UDX4 400 aa16.28■□□□□ 0.2
SNAPC4-201ENST00000298532 PEAK1Q9H792 1746 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 TCRBV7S3A2A0A539 114 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 ARPC2O15144 300 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 ZW10O43264 779 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 CLPXO76031 633 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 L1CAMP32004 1257 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 CXCR3P49682 368 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 KIAA0930Q6ICG6 404 aaPredicted RBP16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 DCBLD1Q8N8Z6 715 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 OR52J3Q8NH60 311 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 DNAJB8Q8NHS0 232 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 AARSD1Q9BTE6 412 aaKnown RBP16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 Q9Y3F1 56 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 COL1A1P02452 1464 aaPredicted RBP16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 FAM86C2PA6NEL3 165 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 hCG_2039718K7EN88 272 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 WWP2O00308 870 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 SLC7A4O43246 635 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 NUDT14O95848 222 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 MTHFD1P11586 935 aaKnown RBP16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 ITIH1P19827 911 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 YAP1P46937 504 aaKnown RBP16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 NPTX1Q15818 432 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 TIGD6Q17RP2 521 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 OLFML2AQ68BL7 652 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 TAS2R7Q9NYW3 318 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 KCPQ6ZWJ8 1503 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 PRAMEF33A0A0G2JMD5 474 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 CXorf49A8MYA2 514 aaPredicted RBP16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 PRAMEF10O60809 474 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 IFNGP01579 166 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 HIST1H2ABP04908 130 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 ALDH3A2P51648 485 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 MTPNP58546 118 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 SKP1P63208 163 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 ZNHIT3Q15649 155 aaPredicted RBP16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 PARP15Q460N3 678 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 RNF44Q7L0R7 432 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 HIST3H2AQ7L7L0 130 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 PYROXD2Q8N2H3 581 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 HIST1H2ACQ93077 130 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 PCDHA2Q9Y5H9 948 aa16.27■□□□□ 0.2
SNAPC4-201ENST00000298532 MATN3O15232 486 aa16.27■□□□□ 0.19
SNAPC4-201ENST00000298532 CYP11A1P05108 521 aa16.27■□□□□ 0.19
SNAPC4-201ENST00000298532 RUNDC3AQ59EK9 446 aa16.27■□□□□ 0.19
SNAPC4-201ENST00000298532 DCST1Q5T197 706 aa16.27■□□□□ 0.19
SNAPC4-201ENST00000298532 HLA-DQA1Q5Y7H0 255 aa16.27■□□□□ 0.19
SNAPC4-201ENST00000298532 RELL1Q8IUW5 271 aa16.27■□□□□ 0.19
SNAPC4-201ENST00000298532 DENND1CQ8IV53 801 aa16.27■□□□□ 0.19
SNAPC4-201ENST00000298532 VANGL1Q8TAA9 524 aaPredicted RBP16.27■□□□□ 0.19
SNAPC4-201ENST00000298532 ZNF420Q8TAQ5 688 aaPredicted RBP16.27■□□□□ 0.19
SNAPC4-201ENST00000298532 FBXL21Q9UKT6 434 aa16.27■□□□□ 0.19
SNAPC4-201ENST00000298532 ERAL1O75616 437 aaKnown RBP16.26■□□□□ 0.19
SNAPC4-201ENST00000298532 SLC25A14O95258 325 aaPredicted RBP16.26■□□□□ 0.19
SNAPC4-201ENST00000298532 YES1P07947 543 aa16.26■□□□□ 0.19
SNAPC4-201ENST00000298532 ATF4P18848 351 aaPredicted RBP16.26■□□□□ 0.19
SNAPC4-201ENST00000298532 CDH12P55289 794 aa16.26■□□□□ 0.19
SNAPC4-201ENST00000298532 CRHR2Q13324 411 aa16.26■□□□□ 0.19
SNAPC4-201ENST00000298532 SGCGQ13326 291 aa16.26■□□□□ 0.19
SNAPC4-201ENST00000298532 GTF2H2Q13888 395 aa16.26■□□□□ 0.19
SNAPC4-201ENST00000298532 GTF2H2CQ6P1K8 395 aa16.26■□□□□ 0.19
SNAPC4-201ENST00000298532 XKR5Q6UX68 686 aa16.26■□□□□ 0.19
SNAPC4-201ENST00000298532 DSG4Q86SJ6 1040 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms