RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 ATE1O95260 518 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 RECKO95980 971 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 CNPP09543 421 aaKnown RBP13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 IRF1P10914 325 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 ZNF23P17027 643 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 MASP1P48740 699 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 SGSHP51688 502 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 TNK2Q07912 1038 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 PMS2P3Q13401 168 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 ZNF235Q14590 738 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 MAPRE2Q15555 327 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 PTPRNQ16849 979 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 KCTD21Q4G0X4 260 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 SETMARQ53H47 684 aaPredicted RBP13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 MORN1Q5T089 497 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 CST9Q5W186 159 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 TMEM26Q6ZUK4 368 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 SYVN1Q86TM6 617 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 MIER2Q8N344 545 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 FAM86B1Q8N7N1 296 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 EEF1AKMT1Q8WVE0 214 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 HAUS8Q9BT25 410 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 ADI1Q9BV57 179 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 MED16Q9Y2X0 877 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 KANSL1LA0AUZ9 987 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 GUCY1B2O75343 617 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 PRAMEF12O95522 483 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 EEF1B2P24534 225 aaKnown RBP13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 GDF5P43026 501 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 GSK3BP49841 420 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 ARHGDIBP52566 201 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 OR4D2P58180 307 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 FGD3Q5JSP0 725 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 TIGD7Q6NT04 549 aaPredicted RBP13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 CFAP161Q6P656 301 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 VASH1Q7L8A9 365 aaPredicted RBP13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 KIAA2013Q8IYS2 634 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 THEM5Q8N1Q8 247 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 CATSPER1Q8NEC5 780 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 MDGA1Q8NFP4 955 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 CLHC1Q8NHS4 586 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 FATE1Q969F0 183 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 MTFMTQ96DP5 389 aaKnown RBP13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 TBCDQ9BTW9 1192 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 TLR9Q9NR96 1032 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 NDUFA13Q9P0J0 144 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 DOLKQ9UPQ8 538 aa13.11□□□□□ -0.31
KCNIP3-201ENST00000295225 GOLGA4Q13439 2230 aaKnown RBP13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 SNTNA6NMZ2 147 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 FFAR3O14843 346 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 FGF10O15520 208 aaPredicted RBP13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 GPR42O15529 346 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 KCNH1O95259 989 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 PTPN2P17706 415 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 HMOX2P30519 316 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 KRT20P35900 424 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 POLR2IP36954 125 aaKnown RBP13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 LIPEQ05469 1076 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 LAPTM4AQ15012 233 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 NADSYN1Q6IA69 706 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 RSPO2Q6UXX9 243 aaPredicted RBP13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 PHYKPLQ8IUZ5 450 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 SYTL1Q8IYJ3 562 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 LGI2Q8N0V4 545 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 FBXO39Q8N4B4 442 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 OR4L1Q8NH43 312 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 TFAP2CQ92754 450 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 FBXO32Q969P5 355 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 C12orf43Q96C57 262 aaKnown RBP13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 ZFRQ96KR1 1074 aaKnown RBP13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 OSBPL11Q9BXB4 747 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 RPF2Q9H7B2 306 aaKnown RBP13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 GKN1Q9NS71 199 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 CUEDC1Q9NWM3 386 aaPredicted RBP13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 MROH6A6NGR9 719 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 PSMD3O43242 534 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 RSL1D1O76021 490 aaKnown RBP13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 C1QCP02747 245 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 EMP3P54852 163 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 ADARP55265 1226 aaKnown RBP13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 POLR2GP62487 172 aaKnown RBP eCLIP13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 LPIN1Q14693 890 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 KLHL35Q6PF15 583 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 SLC22A15Q8IZD6 547 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 AFAP1L2Q8N4X5 818 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 ANKRD53Q8N9V6 530 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 FNDC5Q8NAU1 212 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 LPCAT1Q8NF37 534 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 ATL1Q8WXF7 558 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 SGK3Q96BR1 496 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 CDKN2AIPNLQ96HQ2 116 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 ADNPQ9H2P0 1102 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 CATSPERZQ9NTU4 200 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 RRN3Q9NYV6 651 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 MARCH2Q9P0N8 246 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 GABRQQ9UN88 632 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 U3KQV3 271 aa13.1□□□□□ -0.31
KCNIP3-201ENST00000295225 C17orf113A0A1B0GUU1 675 aa13.09□□□□□ -0.31
KCNIP3-201ENST00000295225 UPK3BL1B0FP48 263 aa13.09□□□□□ -0.31
KCNIP3-201ENST00000295225 UPK3BL2E5RIL1 263 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms